Cluster: MGYG000000798_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000798
- CGC Family ID: CGCFAM_00230
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000798_14 | MGYG000000798_14_29 | 29799 | 31028 | + | 2.A.1.2.25 |
| CAZyme | MGYG000000798_14 | MGYG000000798_14_30 | 31272 | 32597 | + | GH4 |
| TC | MGYG000000798_14 | MGYG000000798_14_31 | 32622 | 34202 | + | 4.A.1.1.14 |
| TF | MGYG000000798_14 | MGYG000000798_14_32 | 34281 | 35081 | + | HTH_6 |
| TC | MGYG000000798_14 | MGYG000000798_14_33 | 35274 | 36836 | - | 4.A.1.1.13 |
| CAZyme | MGYG000000798_14 | MGYG000000798_14_34 | 36919 | 38244 | - | GH4 |
Gene ID: MGYG000000798_14_29
Type: TC
Location: 29799 - 31028 (+)
Type: TC
Location: 29799 - 31028 (+)
Gene ID: MGYG000000798_14_30
Type: CAZyme
Location: 31272 - 32597 (+)
Type: CAZyme
Location: 31272 - 32597 (+)
Gene ID: MGYG000000798_14_31
Type: TC
Location: 32622 - 34202 (+)
Type: TC
Location: 32622 - 34202 (+)
Gene ID: MGYG000000798_14_32
Type: TF
Location: 34281 - 35081 (+)
Type: TF
Location: 34281 - 35081 (+)
Gene ID: MGYG000000798_14_33
Type: TC
Location: 35274 - 36836 (-)
Type: TC
Location: 35274 - 36836 (-)
Gene ID: MGYG000000798_14_34
Type: CAZyme
Location: 36919 - 38244 (-)
Type: CAZyme
Location: 36919 - 38244 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900542945
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.