Cluster: MGYG000000797_CGC7
🧬 Cluster Details
- Gene Count: 13
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000797
- CGC Family ID: CGCFAM_00024
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000797_12 | MGYG000000797_12_11 | 15478 | 16854 | - | GH13_20 |
| TC | MGYG000000797_12 | MGYG000000797_12_12 | 17008 | 18204 | - | 2.A.1.2.18 |
| TC | MGYG000000797_12 | MGYG000000797_12_13 | 18326 | 20686 | - | 9.A.8.1.6 |
| NULL(UNKNOWN) | MGYG000000797_12 | MGYG000000797_12_14 | 20808 | 21128 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | MGYG000000797_12 | MGYG000000797_12_15 | 21176 | 22075 | - | S09.UPW |
| TC | MGYG000000797_12 | MGYG000000797_12_16 | 22322 | 22885 | + | 4.A.1.2.6 |
| TC | MGYG000000797_12 | MGYG000000797_12_17 | 23121 | 25040 | + | 9.B.97.5.1 |
| pfam | MGYG000000797_12 | MGYG000000797_12_18 | 25176 | 26579 | + | tRNA-synt_2 | tRNA_anti-codon |
| NULL(UNKNOWN) | MGYG000000797_12 | MGYG000000797_12_19 | 26829 | 27614 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000797_12 | MGYG000000797_12_20 | 27773 | 28753 | + | 3.A.1.34.1 |
| NULL(UNKNOWN) | MGYG000000797_12 | MGYG000000797_12_21 | 28685 | 28879 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000797_12 | MGYG000000797_12_22 | 28958 | 29881 | + | 3.A.1.34.1 |
| TC | MGYG000000797_12 | MGYG000000797_12_23 | 29874 | 30668 | + | 3.A.1.34.1 |
Gene ID: MGYG000000797_12_11
Type: CAZyme
Location: 15478 - 16854 (-)
Type: CAZyme
Location: 15478 - 16854 (-)
Gene ID: MGYG000000797_12_12
Type: TC
Location: 17008 - 18204 (-)
Type: TC
Location: 17008 - 18204 (-)
Gene ID: MGYG000000797_12_13
Type: TC
Location: 18326 - 20686 (-)
Type: TC
Location: 18326 - 20686 (-)
Gene ID: MGYG000000797_12_14
Type:
Location: 20808 - 21128 (-)
Type:
Location: 20808 - 21128 (-)
Gene ID: MGYG000000797_12_15
Type: peptidase
Location: 21176 - 22075 (-)
Type: peptidase
Location: 21176 - 22075 (-)
Gene ID: MGYG000000797_12_16
Type: TC
Location: 22322 - 22885 (+)
Type: TC
Location: 22322 - 22885 (+)
Gene ID: MGYG000000797_12_17
Type: TC
Location: 23121 - 25040 (+)
Type: TC
Location: 23121 - 25040 (+)
Gene ID: MGYG000000797_12_18
Type: pfam
Location: 25176 - 26579 (+)
Type: pfam
Location: 25176 - 26579 (+)
Gene ID: MGYG000000797_12_19
Type:
Location: 26829 - 27614 (+)
Type:
Location: 26829 - 27614 (+)
Gene ID: MGYG000000797_12_20
Type: TC
Location: 27773 - 28753 (+)
Type: TC
Location: 27773 - 28753 (+)
Gene ID: MGYG000000797_12_21
Type:
Location: 28685 - 28879 (-)
Type:
Location: 28685 - 28879 (-)
Gene ID: MGYG000000797_12_22
Type: TC
Location: 28958 - 29881 (+)
Type: TC
Location: 28958 - 29881 (+)
Gene ID: MGYG000000797_12_23
Type: TC
Location: 29874 - 30668 (+)
Type: TC
Location: 29874 - 30668 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900544755
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000797_12_17 | vegan > omnivore | 1.32676 | 0.00566 |
| MGYG000000797_12_17 | vegetarian > omnivore | 1.42764 | 0.02258 |