Cluster: MGYG000000789_CGC4
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000789
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000789_7 | MGYG000000789_7_33 | 44333 | 47341 | + | GH2 |
| NULL(UNKNOWN) | MGYG000000789_7 | MGYG000000789_7_34 | 47345 | 47800 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000789_7 | MGYG000000789_7_35 | 47954 | 49417 | + | 2.A.3.7.4 |
| STP | MGYG000000789_7 | MGYG000000789_7_36 | 49840 | 50088 | + | PTS-HPr |
| STP | MGYG000000789_7 | MGYG000000789_7_37 | 50277 | 50519 | + | FeoA |
| TC | MGYG000000789_7 | MGYG000000789_7_38 | 50559 | 50780 | + | 9.A.8.1.6 |
| TC | MGYG000000789_7 | MGYG000000789_7_39 | 50904 | 53231 | + | 9.A.8.1.6 |
Gene ID: MGYG000000789_7_33
Type: CAZyme
Location: 44333 - 47341 (+)
Type: CAZyme
Location: 44333 - 47341 (+)
Gene ID: MGYG000000789_7_34
Type:
Location: 47345 - 47800 (+)
Type:
Location: 47345 - 47800 (+)
Gene ID: MGYG000000789_7_35
Type: TC
Location: 47954 - 49417 (+)
Type: TC
Location: 47954 - 49417 (+)
Gene ID: MGYG000000789_7_36
Type: STP
Location: 49840 - 50088 (+)
Type: STP
Location: 49840 - 50088 (+)
Gene ID: MGYG000000789_7_37
Type: STP
Location: 50277 - 50519 (+)
Type: STP
Location: 50277 - 50519 (+)
Gene ID: MGYG000000789_7_38
Type: TC
Location: 50559 - 50780 (+)
Type: TC
Location: 50559 - 50780 (+)
Gene ID: MGYG000000789_7_39
Type: TC
Location: 50904 - 53231 (+)
Type: TC
Location: 50904 - 53231 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900542175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.