Cluster: MGYG000000787_CGC8
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000787
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000787_8 | MGYG000000787_8_20 | 25116 | 27443 | - | 9.A.8.1.6 |
| TC | MGYG000000787_8 | MGYG000000787_8_21 | 27567 | 27788 | - | 9.A.8.1.6 |
| STP | MGYG000000787_8 | MGYG000000787_8_22 | 27828 | 28070 | - | FeoA |
| STP | MGYG000000787_8 | MGYG000000787_8_23 | 28307 | 28555 | - | PTS-HPr |
| TC | MGYG000000787_8 | MGYG000000787_8_24 | 28977 | 30440 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000000787_8 | MGYG000000787_8_25 | 30594 | 31049 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000787_8 | MGYG000000787_8_26 | 31053 | 34061 | - | GH2 |
Gene ID: MGYG000000787_8_20
Type: TC
Location: 25116 - 27443 (-)
Type: TC
Location: 25116 - 27443 (-)
Gene ID: MGYG000000787_8_21
Type: TC
Location: 27567 - 27788 (-)
Type: TC
Location: 27567 - 27788 (-)
Gene ID: MGYG000000787_8_22
Type: STP
Location: 27828 - 28070 (-)
Type: STP
Location: 27828 - 28070 (-)
Gene ID: MGYG000000787_8_23
Type: STP
Location: 28307 - 28555 (-)
Type: STP
Location: 28307 - 28555 (-)
Gene ID: MGYG000000787_8_24
Type: TC
Location: 28977 - 30440 (-)
Type: TC
Location: 28977 - 30440 (-)
Gene ID: MGYG000000787_8_25
Type:
Location: 30594 - 31049 (-)
Type:
Location: 30594 - 31049 (-)
Gene ID: MGYG000000787_8_26
Type: CAZyme
Location: 31053 - 34061 (-)
Type: CAZyme
Location: 31053 - 34061 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp937934885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.