Cluster: MGYG000000787_CGC10
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000787
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000787_40 | MGYG000000787_40_6 | 4496 | 10909 | - | GH31_18 |
| TF | MGYG000000787_40 | MGYG000000787_40_7 | 11424 | 11864 | - | MarR |
| NULL(UNKNOWN) | MGYG000000787_40 | MGYG000000787_40_8 | 11969 | 12295 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000787_40 | MGYG000000787_40_9 | 12491 | 13318 | - | 4.A.6.1.6 |
| TC | MGYG000000787_40 | MGYG000000787_40_10 | 13318 | 14175 | - | 4.A.6.1.1 |
| TC | MGYG000000787_40 | MGYG000000787_40_11 | 14248 | 14736 | - | 4.A.6.1.9 |
Gene ID: MGYG000000787_40_6
Type: CAZyme
Location: 4496 - 10909 (-)
Type: CAZyme
Location: 4496 - 10909 (-)
Gene ID: MGYG000000787_40_7
Type: TF
Location: 11424 - 11864 (-)
Type: TF
Location: 11424 - 11864 (-)
Gene ID: MGYG000000787_40_8
Type:
Location: 11969 - 12295 (-)
Type:
Location: 11969 - 12295 (-)
Gene ID: MGYG000000787_40_9
Type: TC
Location: 12491 - 13318 (-)
Type: TC
Location: 12491 - 13318 (-)
Gene ID: MGYG000000787_40_10
Type: TC
Location: 13318 - 14175 (-)
Type: TC
Location: 13318 - 14175 (-)
Gene ID: MGYG000000787_40_11
Type: TC
Location: 14248 - 14736 (-)
Type: TC
Location: 14248 - 14736 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp937934885
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000787_40_6 | vegetarian > vegan | 2.09365 | 0.02628 |