Cluster: MGYG000000778_CGC13
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000778
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000778_8 | MGYG000000778_8_98 | 99599 | 101293 | + | 4.A.3.1.1 |
| pfam | MGYG000000778_8 | MGYG000000778_8_99 | 101654 | 101959 | - | ParE_toxin |
| NULL(UNKNOWN) | MGYG000000778_8 | MGYG000000778_8_100 | 101949 | 102215 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000778_8 | MGYG000000778_8_101 | 102592 | 104013 | - | GH1 |
| TC | MGYG000000778_8 | MGYG000000778_8_102 | 104089 | 105867 | - | 4.A.3.1.1 |
| TF | MGYG000000778_8 | MGYG000000778_8_103 | 106143 | 107153 | + | LacI |
| CAZyme | MGYG000000778_8 | MGYG000000778_8_104 | 107428 | 108867 | - | GH1 |
| TC | MGYG000000778_8 | MGYG000000778_8_105 | 108934 | 110709 | - | 4.A.3.1.1 |
| TF | MGYG000000778_8 | MGYG000000778_8_106 | 111067 | 112071 | + | LacI |
| TC | MGYG000000778_8 | MGYG000000778_8_107 | 112286 | 112624 | + | 4.A.3.1.2 |
Gene ID: MGYG000000778_8_98
Type: TC
Location: 99599 - 101293 (+)
Type: TC
Location: 99599 - 101293 (+)
Gene ID: MGYG000000778_8_99
Type: pfam
Location: 101654 - 101959 (-)
Type: pfam
Location: 101654 - 101959 (-)
Gene ID: MGYG000000778_8_100
Type:
Location: 101949 - 102215 (-)
Type:
Location: 101949 - 102215 (-)
Gene ID: MGYG000000778_8_101
Type: CAZyme
Location: 102592 - 104013 (-)
Type: CAZyme
Location: 102592 - 104013 (-)
Gene ID: MGYG000000778_8_102
Type: TC
Location: 104089 - 105867 (-)
Type: TC
Location: 104089 - 105867 (-)
Gene ID: MGYG000000778_8_103
Type: TF
Location: 106143 - 107153 (+)
Type: TF
Location: 106143 - 107153 (+)
Gene ID: MGYG000000778_8_104
Type: CAZyme
Location: 107428 - 108867 (-)
Type: CAZyme
Location: 107428 - 108867 (-)
Gene ID: MGYG000000778_8_105
Type: TC
Location: 108934 - 110709 (-)
Type: TC
Location: 108934 - 110709 (-)
Gene ID: MGYG000000778_8_106
Type: TF
Location: 111067 - 112071 (+)
Type: TF
Location: 111067 - 112071 (+)
Gene ID: MGYG000000778_8_107
Type: TC
Location: 112286 - 112624 (+)
Type: TC
Location: 112286 - 112624 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900541645
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.