Cluster: MGYG000000777_CGC8
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 3
- Substrate: host glycan
- Genome ID: MGYG000000777
- CGC Family ID: CGCFAM_00014
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000777_4 | MGYG000000777_4_109 | 109309 | 109791 | + | 4.A.6.1.5 |
| sulfatase | MGYG000000777_4 | MGYG000000777_4_110 | 110118 | 111170 | - | S1_4 |
| TF | MGYG000000777_4 | MGYG000000777_4_111 | 111377 | 112141 | + | HTH_DeoR |
| CAZyme | MGYG000000777_4 | MGYG000000777_4_112 | 112338 | 113759 | - | GH1 |
| TC | MGYG000000777_4 | MGYG000000777_4_113 | 113835 | 115613 | - | 4.A.3.1.1 |
| TF | MGYG000000777_4 | MGYG000000777_4_114 | 115889 | 116899 | + | LacI |
| TC | MGYG000000777_4 | MGYG000000777_4_115 | 117157 | 118917 | - | 4.A.3.1.1 |
| CAZyme | MGYG000000777_4 | MGYG000000777_4_116 | 119094 | 120536 | - | GH1 |
| TF | MGYG000000777_4 | MGYG000000777_4_117 | 120878 | 121915 | + | LacI |
| CAZyme | MGYG000000777_4 | MGYG000000777_4_118 | 122183 | 123622 | - | GH1 |
| NULL(UNKNOWN) | MGYG000000777_4 | MGYG000000777_4_119 | 123689 | 123871 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000777_4 | MGYG000000777_4_120 | 123906 | 125456 | - | 4.A.3.1.1 |
| TF | MGYG000000777_4 | MGYG000000777_4_121 | 125813 | 126817 | + | LacI |
| TC | MGYG000000777_4 | MGYG000000777_4_122 | 127032 | 127370 | + | 4.A.3.1.2 |
Gene ID: MGYG000000777_4_109
Type: TC
Location: 109309 - 109791 (+)
Type: TC
Location: 109309 - 109791 (+)
Gene ID: MGYG000000777_4_110
Type: sulfatase
Location: 110118 - 111170 (-)
Type: sulfatase
Location: 110118 - 111170 (-)
Gene ID: MGYG000000777_4_111
Type: TF
Location: 111377 - 112141 (+)
Type: TF
Location: 111377 - 112141 (+)
Gene ID: MGYG000000777_4_112
Type: CAZyme
Location: 112338 - 113759 (-)
Type: CAZyme
Location: 112338 - 113759 (-)
Gene ID: MGYG000000777_4_113
Type: TC
Location: 113835 - 115613 (-)
Type: TC
Location: 113835 - 115613 (-)
Gene ID: MGYG000000777_4_114
Type: TF
Location: 115889 - 116899 (+)
Type: TF
Location: 115889 - 116899 (+)
Gene ID: MGYG000000777_4_115
Type: TC
Location: 117157 - 118917 (-)
Type: TC
Location: 117157 - 118917 (-)
Gene ID: MGYG000000777_4_116
Type: CAZyme
Location: 119094 - 120536 (-)
Type: CAZyme
Location: 119094 - 120536 (-)
Gene ID: MGYG000000777_4_117
Type: TF
Location: 120878 - 121915 (+)
Type: TF
Location: 120878 - 121915 (+)
Gene ID: MGYG000000777_4_118
Type: CAZyme
Location: 122183 - 123622 (-)
Type: CAZyme
Location: 122183 - 123622 (-)
Gene ID: MGYG000000777_4_119
Type:
Location: 123689 - 123871 (-)
Type:
Location: 123689 - 123871 (-)
Gene ID: MGYG000000777_4_120
Type: TC
Location: 123906 - 125456 (-)
Type: TC
Location: 123906 - 125456 (-)
Gene ID: MGYG000000777_4_121
Type: TF
Location: 125813 - 126817 (+)
Type: TF
Location: 125813 - 126817 (+)
Gene ID: MGYG000000777_4_122
Type: TC
Location: 127032 - 127370 (+)
Type: TC
Location: 127032 - 127370 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900544135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.