Cluster: MGYG000000777_CGC10
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000777
- CGC Family ID: CGCFAM_02159
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000777_7 | MGYG000000777_7_61 | 80167 | 80601 | + | 4.A.6.1.14 |
| TC | MGYG000000777_7 | MGYG000000777_7_62 | 80681 | 81169 | + | 4.A.6.1.9 |
| pfam | MGYG000000777_7 | MGYG000000777_7_63 | 81481 | 82098 | + | EII-Sor |
| TC | MGYG000000777_7 | MGYG000000777_7_64 | 82098 | 82925 | + | 4.A.6.1.6 |
| NULL(UNKNOWN) | MGYG000000777_7 | MGYG000000777_7_65 | 83121 | 83447 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TF | MGYG000000777_7 | MGYG000000777_7_66 | 83552 | 83992 | + | MarR |
| CAZyme | MGYG000000777_7 | MGYG000000777_7_67 | 84504 | 90917 | + | GH31_18 |
Gene ID: MGYG000000777_7_61
Type: TC
Location: 80167 - 80601 (+)
Type: TC
Location: 80167 - 80601 (+)
Gene ID: MGYG000000777_7_62
Type: TC
Location: 80681 - 81169 (+)
Type: TC
Location: 80681 - 81169 (+)
Gene ID: MGYG000000777_7_63
Type: pfam
Location: 81481 - 82098 (+)
Type: pfam
Location: 81481 - 82098 (+)
Gene ID: MGYG000000777_7_64
Type: TC
Location: 82098 - 82925 (+)
Type: TC
Location: 82098 - 82925 (+)
Gene ID: MGYG000000777_7_65
Type:
Location: 83121 - 83447 (+)
Type:
Location: 83121 - 83447 (+)
Gene ID: MGYG000000777_7_66
Type: TF
Location: 83552 - 83992 (+)
Type: TF
Location: 83552 - 83992 (+)
Gene ID: MGYG000000777_7_67
Type: CAZyme
Location: 84504 - 90917 (+)
Type: CAZyme
Location: 84504 - 90917 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900544135
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000777_7_67 | vegetarian > omnivore | 1.31098 | 0.03742 |
| MGYG000000777_7_67 | vegetarian > vegan | 2.03378 | 0.00969 |