Cluster: MGYG000000770_CGC7
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 3
- Substrate:
- Genome ID: MGYG000000770
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000770_1 | MGYG000000770_1_717 | 792244 | 792582 | - | 4.A.3.1.2 |
| TF | MGYG000000770_1 | MGYG000000770_1_718 | 792797 | 793831 | - | LacI |
| TC | MGYG000000770_1 | MGYG000000770_1_719 | 794159 | 795934 | + | 4.A.3.1.1 |
| CAZyme | MGYG000000770_1 | MGYG000000770_1_720 | 796001 | 797440 | + | GH1 |
| TF | MGYG000000770_1 | MGYG000000770_1_721 | 797708 | 798745 | - | LacI |
| CAZyme | MGYG000000770_1 | MGYG000000770_1_722 | 799087 | 800529 | + | GH1 |
| TC | MGYG000000770_1 | MGYG000000770_1_723 | 800706 | 802466 | + | 4.A.3.1.1 |
| TF | MGYG000000770_1 | MGYG000000770_1_724 | 802724 | 803734 | - | LacI |
| TC | MGYG000000770_1 | MGYG000000770_1_725 | 804011 | 805789 | + | 4.A.3.1.1 |
| CAZyme | MGYG000000770_1 | MGYG000000770_1_726 | 805866 | 807287 | + | GH1 |
Gene ID: MGYG000000770_1_717
Type: TC
Location: 792244 - 792582 (-)
Type: TC
Location: 792244 - 792582 (-)
Gene ID: MGYG000000770_1_718
Type: TF
Location: 792797 - 793831 (-)
Type: TF
Location: 792797 - 793831 (-)
Gene ID: MGYG000000770_1_719
Type: TC
Location: 794159 - 795934 (+)
Type: TC
Location: 794159 - 795934 (+)
Gene ID: MGYG000000770_1_720
Type: CAZyme
Location: 796001 - 797440 (+)
Type: CAZyme
Location: 796001 - 797440 (+)
Gene ID: MGYG000000770_1_721
Type: TF
Location: 797708 - 798745 (-)
Type: TF
Location: 797708 - 798745 (-)
Gene ID: MGYG000000770_1_722
Type: CAZyme
Location: 799087 - 800529 (+)
Type: CAZyme
Location: 799087 - 800529 (+)
Gene ID: MGYG000000770_1_723
Type: TC
Location: 800706 - 802466 (+)
Type: TC
Location: 800706 - 802466 (+)
Gene ID: MGYG000000770_1_724
Type: TF
Location: 802724 - 803734 (-)
Type: TF
Location: 802724 - 803734 (-)
Gene ID: MGYG000000770_1_725
Type: TC
Location: 804011 - 805789 (+)
Type: TC
Location: 804011 - 805789 (+)
Gene ID: MGYG000000770_1_726
Type: CAZyme
Location: 805866 - 807287 (+)
Type: CAZyme
Location: 805866 - 807287 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900544095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.