Cluster: MGYG000000770_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000770
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000770_1 | MGYG000000770_1_554 | 604801 | 606177 | - | GH13_20 |
| TC | MGYG000000770_1 | MGYG000000770_1_555 | 606332 | 607528 | - | 2.A.1.2.18 |
| TC | MGYG000000770_1 | MGYG000000770_1_556 | 607653 | 610013 | - | 9.A.8.1.6 |
| NULL(UNKNOWN) | MGYG000000770_1 | MGYG000000770_1_557 | 610135 | 610455 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| peptidase | MGYG000000770_1 | MGYG000000770_1_558 | 610503 | 611402 | - | S09.UPW |
| TC | MGYG000000770_1 | MGYG000000770_1_559 | 611647 | 612210 | + | 4.A.1.2.6 |
| pfam | MGYG000000770_1 | MGYG000000770_1_560 | 612392 | 613795 | + | tRNA-synt_2 | tRNA_anti-codon |
| NULL(UNKNOWN) | MGYG000000770_1 | MGYG000000770_1_561 | 614054 | 614839 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000770_1 | MGYG000000770_1_562 | 615000 | 615980 | + | 3.A.1.34.1 |
| TC | MGYG000000770_1 | MGYG000000770_1_563 | 616185 | 617108 | + | 3.A.1.34.1 |
| TC | MGYG000000770_1 | MGYG000000770_1_564 | 617101 | 617895 | + | 3.A.1.34.1 |
Gene ID: MGYG000000770_1_554
Type: CAZyme
Location: 604801 - 606177 (-)
Type: CAZyme
Location: 604801 - 606177 (-)
Gene ID: MGYG000000770_1_555
Type: TC
Location: 606332 - 607528 (-)
Type: TC
Location: 606332 - 607528 (-)
Gene ID: MGYG000000770_1_556
Type: TC
Location: 607653 - 610013 (-)
Type: TC
Location: 607653 - 610013 (-)
Gene ID: MGYG000000770_1_557
Type:
Location: 610135 - 610455 (-)
Type:
Location: 610135 - 610455 (-)
Gene ID: MGYG000000770_1_558
Type: peptidase
Location: 610503 - 611402 (-)
Type: peptidase
Location: 610503 - 611402 (-)
Gene ID: MGYG000000770_1_559
Type: TC
Location: 611647 - 612210 (+)
Type: TC
Location: 611647 - 612210 (+)
Gene ID: MGYG000000770_1_560
Type: pfam
Location: 612392 - 613795 (+)
Type: pfam
Location: 612392 - 613795 (+)
Gene ID: MGYG000000770_1_561
Type:
Location: 614054 - 614839 (+)
Type:
Location: 614054 - 614839 (+)
Gene ID: MGYG000000770_1_562
Type: TC
Location: 615000 - 615980 (+)
Type: TC
Location: 615000 - 615980 (+)
Gene ID: MGYG000000770_1_563
Type: TC
Location: 616185 - 617108 (+)
Type: TC
Location: 616185 - 617108 (+)
Gene ID: MGYG000000770_1_564
Type: TC
Location: 617101 - 617895 (+)
Type: TC
Location: 617101 - 617895 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900544095
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.