Cluster: MGYG000000769_CGC3
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000769
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000769_2 | MGYG000000769_2_28 | 39098 | 42106 | + | GH2 |
| NULL(UNKNOWN) | MGYG000000769_2 | MGYG000000769_2_29 | 42110 | 42565 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000769_2 | MGYG000000769_2_30 | 42719 | 44182 | + | 2.A.3.7.4 |
| STP | MGYG000000769_2 | MGYG000000769_2_31 | 44605 | 44853 | + | PTS-HPr |
| STP | MGYG000000769_2 | MGYG000000769_2_32 | 45043 | 45285 | + | FeoA |
| TC | MGYG000000769_2 | MGYG000000769_2_33 | 45325 | 45546 | + | 9.A.8.1.6 |
| TC | MGYG000000769_2 | MGYG000000769_2_34 | 45670 | 47997 | + | 9.A.8.1.6 |
Gene ID: MGYG000000769_2_28
Type: CAZyme
Location: 39098 - 42106 (+)
Type: CAZyme
Location: 39098 - 42106 (+)
Gene ID: MGYG000000769_2_29
Type:
Location: 42110 - 42565 (+)
Type:
Location: 42110 - 42565 (+)
Gene ID: MGYG000000769_2_30
Type: TC
Location: 42719 - 44182 (+)
Type: TC
Location: 42719 - 44182 (+)
Gene ID: MGYG000000769_2_31
Type: STP
Location: 44605 - 44853 (+)
Type: STP
Location: 44605 - 44853 (+)
Gene ID: MGYG000000769_2_32
Type: STP
Location: 45043 - 45285 (+)
Type: STP
Location: 45043 - 45285 (+)
Gene ID: MGYG000000769_2_33
Type: TC
Location: 45325 - 45546 (+)
Type: TC
Location: 45325 - 45546 (+)
Gene ID: MGYG000000769_2_34
Type: TC
Location: 45670 - 47997 (+)
Type: TC
Location: 45670 - 47997 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp900544875
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.