Cluster: MGYG000000764_CGC13
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000764
- CGC Family ID: CGCFAM_06311
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000764_8 | MGYG000000764_8_28 | 27690 | 29969 | + | GH20 |
| peptidase | MGYG000000764_8 | MGYG000000764_8_29 | 30076 | 32958 | + | M16.UPB |
| pfam | MGYG000000764_8 | MGYG000000764_8_30 | 33816 | 34559 | - | Gcw_chp |
| TC | MGYG000000764_8 | MGYG000000764_8_31 | 34556 | 35146 | - | 3.A.3.7.2 |
| TC | MGYG000000764_8 | MGYG000000764_8_32 | 35160 | 37178 | - | 3.A.3.7.2 |
| TC | MGYG000000764_8 | MGYG000000764_8_33 | 37182 | 38888 | - | 3.A.3.7.2 |
| TF | MGYG000000764_8 | MGYG000000764_8_34 | 39370 | 40707 | - | HTH_8 |
| TC | MGYG000000764_8 | MGYG000000764_8_35 | 40726 | 42183 | - | 2.A.21.9.1 |
| NULL(UNKNOWN) | MGYG000000764_8 | MGYG000000764_8_36 | 42711 | 43052 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000764_8 | MGYG000000764_8_37 | 43374 | 44660 | - | 2.A.38.1.1 |
Gene ID: MGYG000000764_8_28
Type: CAZyme
Location: 27690 - 29969 (+)
Type: CAZyme
Location: 27690 - 29969 (+)
Gene ID: MGYG000000764_8_29
Type: peptidase
Location: 30076 - 32958 (+)
Type: peptidase
Location: 30076 - 32958 (+)
Gene ID: MGYG000000764_8_30
Type: pfam
Location: 33816 - 34559 (-)
Type: pfam
Location: 33816 - 34559 (-)
Gene ID: MGYG000000764_8_31
Type: TC
Location: 34556 - 35146 (-)
Type: TC
Location: 34556 - 35146 (-)
Gene ID: MGYG000000764_8_32
Type: TC
Location: 35160 - 37178 (-)
Type: TC
Location: 35160 - 37178 (-)
Gene ID: MGYG000000764_8_33
Type: TC
Location: 37182 - 38888 (-)
Type: TC
Location: 37182 - 38888 (-)
Gene ID: MGYG000000764_8_34
Type: TF
Location: 39370 - 40707 (-)
Type: TF
Location: 39370 - 40707 (-)
Gene ID: MGYG000000764_8_35
Type: TC
Location: 40726 - 42183 (-)
Type: TC
Location: 40726 - 42183 (-)
Gene ID: MGYG000000764_8_36
Type:
Location: 42711 - 43052 (+)
Type:
Location: 42711 - 43052 (+)
Gene ID: MGYG000000764_8_37
Type: TC
Location: 43374 - 44660 (-)
Type: TC
Location: 43374 - 44660 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Porphyromonadaceae
Genus
Porphyromonas_A
Species
Porphyromonas_A sp900541275
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.