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Cluster: MGYG000000742_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000000742_18 MGYG000000742_18_14 12952 14280 - GT30
TC MGYG000000742_18 MGYG000000742_18_15 14338 16122 - 3.A.1.106.1
CAZyme MGYG000000742_18 MGYG000000742_18_16 16103 17251 - GT19
pfam MGYG000000742_18 MGYG000000742_18_17 17248 18072 - LpxI_C | LpxI_N
TC MGYG000000742_18 MGYG000000742_18_18 18499 19749 - 2.A.23.4.1
TC MGYG000000742_18 MGYG000000742_18_19 20020 21279 - 2.A.23.4.1
TC MGYG000000742_18 MGYG000000742_18_20 21504 24932 - 3.B.1.1.1
pfam MGYG000000742_18 MGYG000000742_18_21 25472 26425 - Ldh_1_N | Ldh_1_C
TC MGYG000000742_18 MGYG000000742_18_22 26778 27209 + 1.A.22.1.1
Gene ID: MGYG000000742_18_14
Type: CAZyme
Location: 12952 - 14280 (-)
Gene ID: MGYG000000742_18_15
Type: TC
Location: 14338 - 16122 (-)
Gene ID: MGYG000000742_18_16
Type: CAZyme
Location: 16103 - 17251 (-)
Gene ID: MGYG000000742_18_17
Type: pfam
Location: 17248 - 18072 (-)
Gene ID: MGYG000000742_18_18
Type: TC
Location: 18499 - 19749 (-)
Gene ID: MGYG000000742_18_19
Type: TC
Location: 20020 - 21279 (-)
Gene ID: MGYG000000742_18_20
Type: TC
Location: 21504 - 24932 (-)
Gene ID: MGYG000000742_18_21
Type: pfam
Location: 25472 - 26425 (-)
Gene ID: MGYG000000742_18_22
Type: TC
Location: 26778 - 27209 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000742_18_16 vegan > omnivore 20.19608 0.00565
MGYG000000742_18_16 vegetarian > omnivore 20.15239 0.00224

🧭 Explore Read Mapping of CGC

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