Cluster: MGYG000000694_CGC4
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000694
- CGC Family ID: CGCFAM_00289
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000694_2 | MGYG000000694_2_41 | 44472 | 46667 | + | 9.B.97.5.1 |
| NULL(UNKNOWN) | MGYG000000694_2 | MGYG000000694_2_42 | 46898 | 47065 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000694_2 | MGYG000000694_2_43 | 47053 | 48315 | - | 2.A.55.3.6 |
| STP | MGYG000000694_2 | MGYG000000694_2_44 | 48324 | 49163 | - | CBS |
| pfam | MGYG000000694_2 | MGYG000000694_2_45 | 49157 | 50170 | - | MgtE_N |
| CAZyme | MGYG000000694_2 | MGYG000000694_2_46 | 50588 | 51562 | - | CE4 |
Gene ID: MGYG000000694_2_41
Type: TC
Location: 44472 - 46667 (+)
Type: TC
Location: 44472 - 46667 (+)
Gene ID: MGYG000000694_2_42
Type:
Location: 46898 - 47065 (+)
Type:
Location: 46898 - 47065 (+)
Gene ID: MGYG000000694_2_43
Type: TC
Location: 47053 - 48315 (-)
Type: TC
Location: 47053 - 48315 (-)
Gene ID: MGYG000000694_2_44
Type: STP
Location: 48324 - 49163 (-)
Type: STP
Location: 48324 - 49163 (-)
Gene ID: MGYG000000694_2_45
Type: pfam
Location: 49157 - 50170 (-)
Type: pfam
Location: 49157 - 50170 (-)
Gene ID: MGYG000000694_2_46
Type: CAZyme
Location: 50588 - 51562 (-)
Type: CAZyme
Location: 50588 - 51562 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902465105
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.