Cluster: MGYG000000684_CGC17
🧬 Cluster Details
- Gene Count: 8
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000684
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000684_83 | MGYG000000684_83_1 | 1 | 885 | - | GT4 |
| pfam | MGYG000000684_83 | MGYG000000684_83_2 | 900 | 1664 | - | BcrAD_BadFG |
| pfam | MGYG000000684_83 | MGYG000000684_83_3 | 1820 | 2983 | - | HGD-D |
| TC | MGYG000000684_83 | MGYG000000684_83_4 | 3060 | 3845 | - | 3.A.1.5.36 |
| TC | MGYG000000684_83 | MGYG000000684_83_5 | 3835 | 4830 | - | 3.A.1.5.35 |
| TC | MGYG000000684_83 | MGYG000000684_83_6 | 4834 | 5664 | - | 3.A.1.5.39 |
| TC | MGYG000000684_83 | MGYG000000684_83_7 | 5661 | 6614 | - | 3.A.1.5.39 |
| TC | MGYG000000684_83 | MGYG000000684_83_8 | 6703 | 8313 | - | 3.A.1.5.11 |
Gene ID: MGYG000000684_83_1
Type: CAZyme
Location: 1 - 885 (-)
Type: CAZyme
Location: 1 - 885 (-)
Gene ID: MGYG000000684_83_2
Type: pfam
Location: 900 - 1664 (-)
Type: pfam
Location: 900 - 1664 (-)
Gene ID: MGYG000000684_83_3
Type: pfam
Location: 1820 - 2983 (-)
Type: pfam
Location: 1820 - 2983 (-)
Gene ID: MGYG000000684_83_4
Type: TC
Location: 3060 - 3845 (-)
Type: TC
Location: 3060 - 3845 (-)
Gene ID: MGYG000000684_83_5
Type: TC
Location: 3835 - 4830 (-)
Type: TC
Location: 3835 - 4830 (-)
Gene ID: MGYG000000684_83_6
Type: TC
Location: 4834 - 5664 (-)
Type: TC
Location: 4834 - 5664 (-)
Gene ID: MGYG000000684_83_7
Type: TC
Location: 5661 - 6614 (-)
Type: TC
Location: 5661 - 6614 (-)
Gene ID: MGYG000000684_83_8
Type: TC
Location: 6703 - 8313 (-)
Type: TC
Location: 6703 - 8313 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902464965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000684_83_1 | vegan > omnivore | 1.48935 | 0.01144 |
| MGYG000000684_83_4 | vegan > omnivore | 2.36720 | 0.01144 |
| MGYG000000684_83_6 | vegan > omnivore | 2.34476 | 0.01144 |
| MGYG000000684_83_7 | vegan > omnivore | 2.17845 | 0.01144 |
| MGYG000000684_83_8 | vegan > omnivore | 2.72751 | 0.01144 |