Cluster: MGYG000000684_CGC15
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000684
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000684_70 | MGYG000000684_70_1 | 315 | 1979 | + | 4.A.1.1.3 |
| TF | MGYG000000684_70 | MGYG000000684_70_2 | 2042 | 2794 | - | HTH_6 |
| CAZyme | MGYG000000684_70 | MGYG000000684_70_3 | 2970 | 4343 | + | GH4 |
| NULL(UNKNOWN) | MGYG000000684_70 | MGYG000000684_70_4 | 4509 | 5261 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000684_70 | MGYG000000684_70_5 | 5437 | 6633 | + | 2.A.1.2.18 |
| CAZyme | MGYG000000684_70 | MGYG000000684_70_6 | 6788 | 8164 | + | GH13_20 |
Gene ID: MGYG000000684_70_1
Type: TC
Location: 315 - 1979 (+)
Type: TC
Location: 315 - 1979 (+)
Gene ID: MGYG000000684_70_2
Type: TF
Location: 2042 - 2794 (-)
Type: TF
Location: 2042 - 2794 (-)
Gene ID: MGYG000000684_70_3
Type: CAZyme
Location: 2970 - 4343 (+)
Type: CAZyme
Location: 2970 - 4343 (+)
Gene ID: MGYG000000684_70_4
Type:
Location: 4509 - 5261 (+)
Type:
Location: 4509 - 5261 (+)
Gene ID: MGYG000000684_70_5
Type: TC
Location: 5437 - 6633 (+)
Type: TC
Location: 5437 - 6633 (+)
Gene ID: MGYG000000684_70_6
Type: CAZyme
Location: 6788 - 8164 (+)
Type: CAZyme
Location: 6788 - 8164 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902464965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000684_70_4 | vegan > omnivore | 1.03048 | 0.02198 |