Cluster: MGYG000000684_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000000684
- CGC Family ID: CGCFAM_00464
- Continent: Asia
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000684_1 | MGYG000000684_1_32 | 44947 | 46185 | - | GH105 |
| pfam | MGYG000000684_1 | MGYG000000684_1_33 | 46292 | 46960 | - | Lipase_GDSL | Lipase_GDSL_2 |
| CAZyme | MGYG000000684_1 | MGYG000000684_1_34 | 47030 | 48130 | - | CE19 |
| CAZyme | MGYG000000684_1 | MGYG000000684_1_35 | 48152 | 49195 | - | CE8 |
| peptidase | MGYG000000684_1 | MGYG000000684_1_36 | 49192 | 50001 | - | S09.UPW |
| CAZyme | MGYG000000684_1 | MGYG000000684_1_37 | 50106 | 51701 | - | GH28 |
| TC | MGYG000000684_1 | MGYG000000684_1_38 | 51817 | 53376 | - | 2.A.2.5.1 |
Gene ID: MGYG000000684_1_32
Type: CAZyme
Location: 44947 - 46185 (-)
Type: CAZyme
Location: 44947 - 46185 (-)
Gene ID: MGYG000000684_1_33
Type: pfam
Location: 46292 - 46960 (-)
Type: pfam
Location: 46292 - 46960 (-)
Gene ID: MGYG000000684_1_34
Type: CAZyme
Location: 47030 - 48130 (-)
Type: CAZyme
Location: 47030 - 48130 (-)
Gene ID: MGYG000000684_1_35
Type: CAZyme
Location: 48152 - 49195 (-)
Type: CAZyme
Location: 48152 - 49195 (-)
Gene ID: MGYG000000684_1_36
Type: peptidase
Location: 49192 - 50001 (-)
Type: peptidase
Location: 49192 - 50001 (-)
Gene ID: MGYG000000684_1_37
Type: CAZyme
Location: 50106 - 51701 (-)
Type: CAZyme
Location: 50106 - 51701 (-)
Gene ID: MGYG000000684_1_38
Type: TC
Location: 51817 - 53376 (-)
Type: TC
Location: 51817 - 53376 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902464965
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.