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Cluster: MGYG000000676_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000000676_39 MGYG000000676_39_4 2601 4775 + GH112
STP MGYG000000676_39 MGYG000000676_39_5 4966 5742 + Sigma70_r2 | Sigma70_r3 | Sigma70_r4
TF MGYG000000676_39 MGYG000000676_39_6 5879 6661 - HTH_AraC | HTH_AraC
CAZyme MGYG000000676_39 MGYG000000676_39_7 6907 8901 + GH78
CAZyme MGYG000000676_39 MGYG000000676_39_8 9111 11531 + GH38
CAZyme MGYG000000676_39 MGYG000000676_39_9 11664 14504 + GH106
CAZyme MGYG000000676_39 MGYG000000676_39_10 14557 16542 + CBM67 | GH78
pfam MGYG000000676_39 MGYG000000676_39_11 16588 17196 - PseudoU_synth_2
TC MGYG000000676_39 MGYG000000676_39_12 17162 19339 - 9.A.8.1.2
Gene ID: MGYG000000676_39_4
Type: CAZyme
Location: 2601 - 4775 (+)
Gene ID: MGYG000000676_39_5
Type: STP
Location: 4966 - 5742 (+)
Gene ID: MGYG000000676_39_6
Type: TF
Location: 5879 - 6661 (-)
Gene ID: MGYG000000676_39_7
Type: CAZyme
Location: 6907 - 8901 (+)
Gene ID: MGYG000000676_39_8
Type: CAZyme
Location: 9111 - 11531 (+)
Gene ID: MGYG000000676_39_9
Type: CAZyme
Location: 11664 - 14504 (+)
Gene ID: MGYG000000676_39_10
Type: CAZyme
Location: 14557 - 16542 (+)
Gene ID: MGYG000000676_39_11
Type: pfam
Location: 16588 - 17196 (-)
Gene ID: MGYG000000676_39_12
Type: TC
Location: 17162 - 19339 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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