Cluster: MGYG000000649_CGC4
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000649
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000649_4 | MGYG000000649_4_73 | 85171 | 85965 | - | 3.A.1.34.1 |
| TC | MGYG000000649_4 | MGYG000000649_4_74 | 85958 | 86881 | - | 3.A.1.34.1 |
| TC | MGYG000000649_4 | MGYG000000649_4_75 | 87085 | 88065 | - | 3.A.1.34.1 |
| NULL(UNKNOWN) | MGYG000000649_4 | MGYG000000649_4_76 | 88226 | 89011 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000000649_4 | MGYG000000649_4_77 | 89271 | 90674 | - | tRNA-synt_2 | tRNA_anti-codon |
| TC | MGYG000000649_4 | MGYG000000649_4_78 | 90856 | 91419 | - | 4.A.1.2.6 |
| peptidase | MGYG000000649_4 | MGYG000000649_4_79 | 91663 | 92565 | + | S09.UPW |
| TC | MGYG000000649_4 | MGYG000000649_4_80 | 92998 | 95358 | + | 9.A.8.1.6 |
| TC | MGYG000000649_4 | MGYG000000649_4_81 | 95479 | 96675 | + | 2.A.1.2.18 |
| CAZyme | MGYG000000649_4 | MGYG000000649_4_82 | 96829 | 98205 | + | GH13_20 |
Gene ID: MGYG000000649_4_73
Type: TC
Location: 85171 - 85965 (-)
Type: TC
Location: 85171 - 85965 (-)
Gene ID: MGYG000000649_4_74
Type: TC
Location: 85958 - 86881 (-)
Type: TC
Location: 85958 - 86881 (-)
Gene ID: MGYG000000649_4_75
Type: TC
Location: 87085 - 88065 (-)
Type: TC
Location: 87085 - 88065 (-)
Gene ID: MGYG000000649_4_76
Type:
Location: 88226 - 89011 (-)
Type:
Location: 88226 - 89011 (-)
Gene ID: MGYG000000649_4_77
Type: pfam
Location: 89271 - 90674 (-)
Type: pfam
Location: 89271 - 90674 (-)
Gene ID: MGYG000000649_4_78
Type: TC
Location: 90856 - 91419 (-)
Type: TC
Location: 90856 - 91419 (-)
Gene ID: MGYG000000649_4_79
Type: peptidase
Location: 91663 - 92565 (+)
Type: peptidase
Location: 91663 - 92565 (+)
Gene ID: MGYG000000649_4_80
Type: TC
Location: 92998 - 95358 (+)
Type: TC
Location: 92998 - 95358 (+)
Gene ID: MGYG000000649_4_81
Type: TC
Location: 95479 - 96675 (+)
Type: TC
Location: 95479 - 96675 (+)
Gene ID: MGYG000000649_4_82
Type: CAZyme
Location: 96829 - 98205 (+)
Type: CAZyme
Location: 96829 - 98205 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902464565
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.