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Cluster: MGYG000000648_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000648_2 MGYG000000648_2_86 91253 92020 - 3.A.1.103.1
TC MGYG000000648_2 MGYG000000648_2_87 92033 92878 - 3.A.1.103.6
CAZyme MGYG000000648_2 MGYG000000648_2_88 93040 93969 + GT81
CAZyme MGYG000000648_2 MGYG000000648_2_89 94001 95842 - GT2
pfam MGYG000000648_2 MGYG000000648_2_90 95875 97062 - LicD
CAZyme MGYG000000648_2 MGYG000000648_2_91 97162 98997 - GT2
Gene ID: MGYG000000648_2_86
Type: TC
Location: 91253 - 92020 (-)
Gene ID: MGYG000000648_2_87
Type: TC
Location: 92033 - 92878 (-)
Gene ID: MGYG000000648_2_88
Type: CAZyme
Location: 93040 - 93969 (+)
Gene ID: MGYG000000648_2_89
Type: CAZyme
Location: 94001 - 95842 (-)
Gene ID: MGYG000000648_2_90
Type: pfam
Location: 95875 - 97062 (-)
Gene ID: MGYG000000648_2_91
Type: CAZyme
Location: 97162 - 98997 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000648_2_87 vegan > omnivore 1.92075 0.01332
MGYG000000648_2_88 vegan > omnivore 1.54874 0.01332
MGYG000000648_2_89 vegan > omnivore 17.33982 0.01332
MGYG000000648_2_90 vegan > omnivore 17.56417 0.01332
MGYG000000648_2_91 vegan > omnivore 10.18914 0.01332

🧭 Explore Read Mapping of CGC

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