Cluster: MGYG000000646_CGC24
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000646
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000646_4 | MGYG000000646_4_96 | 126742 | 129261 | + | 3.A.3.5.15 |
| NULL(UNKNOWN) | MGYG000000646_4 | MGYG000000646_4_97 | 129313 | 129498 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000000646_4 | MGYG000000646_4_98 | 129522 | 130556 | - | Radical_SAM |
| TC | MGYG000000646_4 | MGYG000000646_4_99 | 130617 | 131429 | - | 3.A.1.34.1 |
| TC | MGYG000000646_4 | MGYG000000646_4_100 | 131429 | 132328 | - | 3.A.1.34.1 |
| pfam | MGYG000000646_4 | MGYG000000646_4_101 | 132447 | 133469 | - | ABC_sub_bind |
| CAZyme | MGYG000000646_4 | MGYG000000646_4_102 | 133696 | 135999 | - | GH31_2 |
| peptidase | MGYG000000646_4 | MGYG000000646_4_103 | 135999 | 137327 | - | S09.UPW |
| TC | MGYG000000646_4 | MGYG000000646_4_104 | 137349 | 138749 | - | 2.A.2.3.1 |
| TF | MGYG000000646_4 | MGYG000000646_4_105 | 139466 | 140053 | + | LexA_DNA_bind |
| TC | MGYG000000646_4 | MGYG000000646_4_106 | 140151 | 140972 | + | 3.A.1.132.3 |
Gene ID: MGYG000000646_4_96
Type: TC
Location: 126742 - 129261 (+)
Type: TC
Location: 126742 - 129261 (+)
Gene ID: MGYG000000646_4_97
Type:
Location: 129313 - 129498 (-)
Type:
Location: 129313 - 129498 (-)
Gene ID: MGYG000000646_4_98
Type: pfam
Location: 129522 - 130556 (-)
Type: pfam
Location: 129522 - 130556 (-)
Gene ID: MGYG000000646_4_99
Type: TC
Location: 130617 - 131429 (-)
Type: TC
Location: 130617 - 131429 (-)
Gene ID: MGYG000000646_4_100
Type: TC
Location: 131429 - 132328 (-)
Type: TC
Location: 131429 - 132328 (-)
Gene ID: MGYG000000646_4_101
Type: pfam
Location: 132447 - 133469 (-)
Type: pfam
Location: 132447 - 133469 (-)
Gene ID: MGYG000000646_4_102
Type: CAZyme
Location: 133696 - 135999 (-)
Type: CAZyme
Location: 133696 - 135999 (-)
Gene ID: MGYG000000646_4_103
Type: peptidase
Location: 135999 - 137327 (-)
Type: peptidase
Location: 135999 - 137327 (-)
Gene ID: MGYG000000646_4_104
Type: TC
Location: 137349 - 138749 (-)
Type: TC
Location: 137349 - 138749 (-)
Gene ID: MGYG000000646_4_105
Type: TF
Location: 139466 - 140053 (+)
Type: TF
Location: 139466 - 140053 (+)
Gene ID: MGYG000000646_4_106
Type: TC
Location: 140151 - 140972 (+)
Type: TC
Location: 140151 - 140972 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp000436835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000646_4_100 | vegetarian > omnivore | 1.01047 | 0.00313 |
| MGYG000000646_4_100 | vegetarian > vegan | 1.20909 | 0.01497 |
| MGYG000000646_4_102 | vegan > omnivore | 1.91596 | 0.01332 |
| MGYG000000646_4_102 | vegetarian > omnivore | 3.27817 | 0.00313 |
| MGYG000000646_4_102 | vegetarian > vegan | 1.36221 | 0.01497 |
| MGYG000000646_4_103 | vegan > omnivore | 17.43126 | 0.01332 |
| MGYG000000646_4_103 | vegetarian > omnivore | 19.38278 | 0.00313 |
| MGYG000000646_4_103 | vegetarian > vegan | 1.95152 | 0.01497 |
| MGYG000000646_4_104 | vegan > omnivore | 4.13248 | 0.01332 |
| MGYG000000646_4_104 | vegetarian > omnivore | 6.10811 | 0.00313 |
| MGYG000000646_4_104 | vegetarian > vegan | 1.97562 | 0.01497 |