Cluster: MGYG000000646_CGC20
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000646
- CGC Family ID: CGCFAM_07977
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000646_3 | MGYG000000646_3_256 | 286325 | 286552 | - | 3.D.1.6.4 |
| pfam | MGYG000000646_3 | MGYG000000646_3_257 | 286672 | 287502 | + | Shikimate_dh_N |
| STP | MGYG000000646_3 | MGYG000000646_3_258 | 287499 | 287987 | + | SKI |
| TC | MGYG000000646_3 | MGYG000000646_3_259 | 288079 | 288915 | + | 3.A.1.103.6 |
| NULL(UNKNOWN) | MGYG000000646_3 | MGYG000000646_3_260 | 288982 | 289422 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| STP | MGYG000000646_3 | MGYG000000646_3_261 | 289409 | 290479 | - | Aminotran_1_2 |
| CAZyme | MGYG000000646_3 | MGYG000000646_3_262 | 290588 | 292384 | - | GH25 |
| CAZyme | MGYG000000646_3 | MGYG000000646_3_263 | 292395 | 293186 | - | GH25 |
| TC | MGYG000000646_3 | MGYG000000646_3_264 | 293402 | 294550 | - | 2.A.86.1.3 |
Gene ID: MGYG000000646_3_256
Type: TC
Location: 286325 - 286552 (-)
Type: TC
Location: 286325 - 286552 (-)
Gene ID: MGYG000000646_3_257
Type: pfam
Location: 286672 - 287502 (+)
Type: pfam
Location: 286672 - 287502 (+)
Gene ID: MGYG000000646_3_258
Type: STP
Location: 287499 - 287987 (+)
Type: STP
Location: 287499 - 287987 (+)
Gene ID: MGYG000000646_3_259
Type: TC
Location: 288079 - 288915 (+)
Type: TC
Location: 288079 - 288915 (+)
Gene ID: MGYG000000646_3_260
Type:
Location: 288982 - 289422 (-)
Type:
Location: 288982 - 289422 (-)
Gene ID: MGYG000000646_3_261
Type: STP
Location: 289409 - 290479 (-)
Type: STP
Location: 289409 - 290479 (-)
Gene ID: MGYG000000646_3_262
Type: CAZyme
Location: 290588 - 292384 (-)
Type: CAZyme
Location: 290588 - 292384 (-)
Gene ID: MGYG000000646_3_263
Type: CAZyme
Location: 292395 - 293186 (-)
Type: CAZyme
Location: 292395 - 293186 (-)
Gene ID: MGYG000000646_3_264
Type: TC
Location: 293402 - 294550 (-)
Type: TC
Location: 293402 - 294550 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp000436835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000646_3_256 | vegetarian > omnivore | 1.74815 | 0.00313 |
| MGYG000000646_3_256 | vegetarian > vegan | 1.16629 | 0.01497 |
| MGYG000000646_3_259 | vegetarian > omnivore | 1.52905 | 0.00313 |
| MGYG000000646_3_259 | vegetarian > vegan | 1.07107 | 0.01497 |
| MGYG000000646_3_261 | vegetarian > omnivore | 1.69182 | 0.00313 |
| MGYG000000646_3_261 | vegetarian > vegan | 1.21499 | 0.01497 |
| MGYG000000646_3_264 | vegetarian > omnivore | 1.74257 | 0.00313 |
| MGYG000000646_3_264 | vegetarian > vegan | 1.29091 | 0.01497 |