Cluster: MGYG000000646_CGC19
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000646
- CGC Family ID: CGCFAM_01468
- Continent: Europe
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000646_3 | MGYG000000646_3_246 | 273674 | 274510 | - | GT8 |
| NULL(UNKNOWN) | MGYG000000646_3 | MGYG000000646_3_247 | 274783 | 275271 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | MGYG000000646_3 | MGYG000000646_3_248 | 275534 | 277390 | - | 3.A.1.135.5 |
| TC | MGYG000000646_3 | MGYG000000646_3_249 | 277390 | 279135 | - | 3.A.1.135.5 |
| TF | MGYG000000646_3 | MGYG000000646_3_250 | 279129 | 279614 | - | MarR |
| pfam | MGYG000000646_3 | MGYG000000646_3_251 | 279869 | 280723 | + | RrnaAD |
| TC | MGYG000000646_3 | MGYG000000646_3_252 | 280769 | 282160 | + | 2.A.66.1.13 |
Gene ID: MGYG000000646_3_246
Type: CAZyme
Location: 273674 - 274510 (-)
Type: CAZyme
Location: 273674 - 274510 (-)
Gene ID: MGYG000000646_3_247
Type:
Location: 274783 - 275271 (-)
Type:
Location: 274783 - 275271 (-)
Gene ID: MGYG000000646_3_248
Type: TC
Location: 275534 - 277390 (-)
Type: TC
Location: 275534 - 277390 (-)
Gene ID: MGYG000000646_3_249
Type: TC
Location: 277390 - 279135 (-)
Type: TC
Location: 277390 - 279135 (-)
Gene ID: MGYG000000646_3_250
Type: TF
Location: 279129 - 279614 (-)
Type: TF
Location: 279129 - 279614 (-)
Gene ID: MGYG000000646_3_251
Type: pfam
Location: 279869 - 280723 (+)
Type: pfam
Location: 279869 - 280723 (+)
Gene ID: MGYG000000646_3_252
Type: TC
Location: 280769 - 282160 (+)
Type: TC
Location: 280769 - 282160 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_A
Class
Clostridia
Order
Oscillospirales
Family
Acutalibacteraceae
Genus
Eubacterium_R
Species
Eubacterium_R sp000436835
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000646_3_247 | vegan > omnivore | 16.96234 | 0.01332 |
| MGYG000000646_3_247 | vegetarian > omnivore | 18.34112 | 0.00313 |
| MGYG000000646_3_247 | vegetarian > vegan | 1.37878 | 0.01497 |
| MGYG000000646_3_248 | vegetarian > omnivore | 1.84008 | 0.00313 |
| MGYG000000646_3_249 | vegetarian > omnivore | 1.79339 | 0.00313 |
| MGYG000000646_3_249 | vegetarian > vegan | 1.51533 | 0.01497 |
| MGYG000000646_3_251 | vegan > omnivore | 1.01582 | 0.01332 |
| MGYG000000646_3_251 | vegetarian > omnivore | 1.33967 | 0.00313 |
| MGYG000000646_3_252 | vegetarian > omnivore | 1.45258 | 0.00313 |