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Cluster: MGYG000000646_CGC18

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000646_3 MGYG000000646_3_200 222996 223895 + 3.A.1.3.2
TC MGYG000000646_3 MGYG000000646_3_201 223965 224669 + 3.A.1.3.20
TC MGYG000000646_3 MGYG000000646_3_202 224656 225378 + 3.A.1.3.25
CAZyme MGYG000000646_3 MGYG000000646_3_203 225439 226776 - CE4
pfam MGYG000000646_3 MGYG000000646_3_204 227048 229285 - UvrD-helicase | AAA_19 | UvrD_C | UvrD_C_2 | PcrA_UvrD_tudor
TC MGYG000000646_3 MGYG000000646_3_205 229380 230588 - 3.B.1.1.2
Gene ID: MGYG000000646_3_200
Type: TC
Location: 222996 - 223895 (+)
Gene ID: MGYG000000646_3_201
Type: TC
Location: 223965 - 224669 (+)
Gene ID: MGYG000000646_3_202
Type: TC
Location: 224656 - 225378 (+)
Gene ID: MGYG000000646_3_203
Type: CAZyme
Location: 225439 - 226776 (-)
Gene ID: MGYG000000646_3_204
Type: pfam
Location: 227048 - 229285 (-)
Gene ID: MGYG000000646_3_205
Type: TC
Location: 229380 - 230588 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000646_3_200 vegetarian > omnivore 1.32600 0.00313
MGYG000000646_3_201 vegan > omnivore 1.09652 0.01332
MGYG000000646_3_201 vegetarian > omnivore 1.46815 0.00313

🧭 Explore Read Mapping of CGC

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