Cluster: MGYG000000643_CGC5
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000643
- CGC Family ID: CGCFAM_10748
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000643_10 | MGYG000000643_10_16 | 20761 | 22182 | - | AA4 |
| TC | MGYG000000643_10 | MGYG000000643_10_17 | 22489 | 24702 | + | 9.B.106.3.1 |
| STP | MGYG000000643_10 | MGYG000000643_10_18 | 24801 | 25697 | + | FmdA_AmdA | FmdA_AmdA |
| pfam | MGYG000000643_10 | MGYG000000643_10_19 | 25834 | 26031 | - | DUF6724 |
| TC | MGYG000000643_10 | MGYG000000643_10_20 | 26352 | 29234 | - | 5.A.3.3.2 |
Gene ID: MGYG000000643_10_16
Type: CAZyme
Location: 20761 - 22182 (-)
Type: CAZyme
Location: 20761 - 22182 (-)
Gene ID: MGYG000000643_10_17
Type: TC
Location: 22489 - 24702 (+)
Type: TC
Location: 22489 - 24702 (+)
Gene ID: MGYG000000643_10_18
Type: STP
Location: 24801 - 25697 (+)
Type: STP
Location: 24801 - 25697 (+)
Gene ID: MGYG000000643_10_19
Type: pfam
Location: 25834 - 26031 (-)
Type: pfam
Location: 25834 - 26031 (-)
Gene ID: MGYG000000643_10_20
Type: TC
Location: 26352 - 29234 (-)
Type: TC
Location: 26352 - 29234 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Senegalimassilia
Species
Senegalimassilia sp902464545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000643_10_20 | vegan > omnivore | 2.47238 | 0.03994 |
| MGYG000000643_10_20 | vegetarian > omnivore | 2.36534 | 0.00160 |