Cluster: MGYG000000643_CGC3
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000643
- CGC Family ID: CGCFAM_00881
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000643_5 | MGYG000000643_5_86 | 98781 | 100865 | - | 3.A.1.121.4 |
| NULL(UNKNOWN) | MGYG000000643_5 | MGYG000000643_5_87 | 101566 | 104061 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | MGYG000000643_5 | MGYG000000643_5_88 | 104114 | 104476 | + | Hpt |
| CAZyme | MGYG000000643_5 | MGYG000000643_5_89 | 104623 | 106494 | - | GH25 |
Gene ID: MGYG000000643_5_86
Type: TC
Location: 98781 - 100865 (-)
Type: TC
Location: 98781 - 100865 (-)
Gene ID: MGYG000000643_5_87
Type:
Location: 101566 - 104061 (-)
Type:
Location: 101566 - 104061 (-)
Gene ID: MGYG000000643_5_88
Type: pfam
Location: 104114 - 104476 (+)
Type: pfam
Location: 104114 - 104476 (+)
Gene ID: MGYG000000643_5_89
Type: CAZyme
Location: 104623 - 106494 (-)
Type: CAZyme
Location: 104623 - 106494 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Senegalimassilia
Species
Senegalimassilia sp902464545
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000643_5_87 | vegetarian > omnivore | 1.18821 | 0.00160 |