Cluster: MGYG000000642_CGC5
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000000642
- CGC Family ID: CGCFAM_00029
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000642_2 | MGYG000000642_2_92 | 96533 | 97594 | + | GT2 |
| pfam | MGYG000000642_2 | MGYG000000642_2_93 | 97597 | 98292 | + | DUF1919 |
| CAZyme | MGYG000000642_2 | MGYG000000642_2_94 | 98458 | 99576 | - | GT4 |
| pfam | MGYG000000642_2 | MGYG000000642_2_95 | 99588 | 101180 | - | Wzy_C |
| CAZyme | MGYG000000642_2 | MGYG000000642_2_96 | 101296 | 102297 | + | GT2 |
| TF | MGYG000000642_2 | MGYG000000642_2_97 | 102470 | 103786 | + | SirB |
| CAZyme | MGYG000000642_2 | MGYG000000642_2_98 | 103876 | 104862 | - | GT2 |
| pfam | MGYG000000642_2 | MGYG000000642_2_99 | 104846 | 105835 | - | LicD |
| TC | MGYG000000642_2 | MGYG000000642_2_100 | 106013 | 107800 | - | 9.B.18.2.1 |
| pfam | MGYG000000642_2 | MGYG000000642_2_101 | 107928 | 109148 | + | Aminotran_1_2 | DegT_DnrJ_EryC1 | Cys_Met_Meta_PP |
| TC | MGYG000000642_2 | MGYG000000642_2_102 | 109155 | 109748 | + | 9.B.18.1.3 |
Gene ID: MGYG000000642_2_92
Type: CAZyme
Location: 96533 - 97594 (+)
Type: CAZyme
Location: 96533 - 97594 (+)
Gene ID: MGYG000000642_2_93
Type: pfam
Location: 97597 - 98292 (+)
Type: pfam
Location: 97597 - 98292 (+)
Gene ID: MGYG000000642_2_94
Type: CAZyme
Location: 98458 - 99576 (-)
Type: CAZyme
Location: 98458 - 99576 (-)
Gene ID: MGYG000000642_2_95
Type: pfam
Location: 99588 - 101180 (-)
Type: pfam
Location: 99588 - 101180 (-)
Gene ID: MGYG000000642_2_96
Type: CAZyme
Location: 101296 - 102297 (+)
Type: CAZyme
Location: 101296 - 102297 (+)
Gene ID: MGYG000000642_2_97
Type: TF
Location: 102470 - 103786 (+)
Type: TF
Location: 102470 - 103786 (+)
Gene ID: MGYG000000642_2_98
Type: CAZyme
Location: 103876 - 104862 (-)
Type: CAZyme
Location: 103876 - 104862 (-)
Gene ID: MGYG000000642_2_99
Type: pfam
Location: 104846 - 105835 (-)
Type: pfam
Location: 104846 - 105835 (-)
Gene ID: MGYG000000642_2_100
Type: TC
Location: 106013 - 107800 (-)
Type: TC
Location: 106013 - 107800 (-)
Gene ID: MGYG000000642_2_101
Type: pfam
Location: 107928 - 109148 (+)
Type: pfam
Location: 107928 - 109148 (+)
Gene ID: MGYG000000642_2_102
Type: TC
Location: 109155 - 109748 (+)
Type: TC
Location: 109155 - 109748 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Arcanobacterium_A
Species
Arcanobacterium_A sp902464405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.