Cluster: MGYG000000642_CGC3
🧬 Cluster Details
- Gene Count: 11
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000642
- CGC Family ID: CGCFAM_09489
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000642_1 | MGYG000000642_1_146 | 171393 | 172409 | + | 3.A.1.1.20 |
| TC | MGYG000000642_1 | MGYG000000642_1_147 | 172464 | 173342 | + | 3.A.1.1.41 |
| STP | MGYG000000642_1 | MGYG000000642_1_148 | 173412 | 174773 | + | SBP_bac_1 |
| CAZyme | MGYG000000642_1 | MGYG000000642_1_149 | 174845 | 176371 | + | GH36 |
| pfam | MGYG000000642_1 | MGYG000000642_1_150 | 176610 | 177713 | + | Ldh_1_N | Ldh_1_C |
| TC | MGYG000000642_1 | MGYG000000642_1_151 | 177783 | 178685 | + | 2.A.5.5.5 |
| pfam | MGYG000000642_1 | MGYG000000642_1_152 | 178916 | 179785 | + | H2O2_YaaD |
| pfam | MGYG000000642_1 | MGYG000000642_1_153 | 179790 | 180704 | + | YwiC |
| TC | MGYG000000642_1 | MGYG000000642_1_154 | 180764 | 182638 | - | 9.B.106.2.2 |
| peptidase | MGYG000000642_1 | MGYG000000642_1_155 | 182753 | 184174 | - | X52.001 |
| TC | MGYG000000642_1 | MGYG000000642_1_156 | 184171 | 185658 | - | 2.A.103.1.7 |
Gene ID: MGYG000000642_1_146
Type: TC
Location: 171393 - 172409 (+)
Type: TC
Location: 171393 - 172409 (+)
Gene ID: MGYG000000642_1_147
Type: TC
Location: 172464 - 173342 (+)
Type: TC
Location: 172464 - 173342 (+)
Gene ID: MGYG000000642_1_148
Type: STP
Location: 173412 - 174773 (+)
Type: STP
Location: 173412 - 174773 (+)
Gene ID: MGYG000000642_1_149
Type: CAZyme
Location: 174845 - 176371 (+)
Type: CAZyme
Location: 174845 - 176371 (+)
Gene ID: MGYG000000642_1_150
Type: pfam
Location: 176610 - 177713 (+)
Type: pfam
Location: 176610 - 177713 (+)
Gene ID: MGYG000000642_1_151
Type: TC
Location: 177783 - 178685 (+)
Type: TC
Location: 177783 - 178685 (+)
Gene ID: MGYG000000642_1_152
Type: pfam
Location: 178916 - 179785 (+)
Type: pfam
Location: 178916 - 179785 (+)
Gene ID: MGYG000000642_1_153
Type: pfam
Location: 179790 - 180704 (+)
Type: pfam
Location: 179790 - 180704 (+)
Gene ID: MGYG000000642_1_154
Type: TC
Location: 180764 - 182638 (-)
Type: TC
Location: 180764 - 182638 (-)
Gene ID: MGYG000000642_1_155
Type: peptidase
Location: 182753 - 184174 (-)
Type: peptidase
Location: 182753 - 184174 (-)
Gene ID: MGYG000000642_1_156
Type: TC
Location: 184171 - 185658 (-)
Type: TC
Location: 184171 - 185658 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Actinomycetes
Order
Actinomycetales
Family
Actinomycetaceae
Genus
Arcanobacterium_A
Species
Arcanobacterium_A sp902464405
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.