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Cluster: MGYG000000635_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000635_13 MGYG000000635_13_1 159 1985 + 9.B.18.2.1
CAZyme MGYG000000635_13 MGYG000000635_13_2 2120 3235 - GT2
TC MGYG000000635_13 MGYG000000635_13_3 3243 5135 - 3.A.1.103.1
TC MGYG000000635_13 MGYG000000635_13_4 5145 5936 - 3.A.1.103.6
CAZyme MGYG000000635_13 MGYG000000635_13_5 6222 7751 + GH25
pfam MGYG000000635_13 MGYG000000635_13_6 7908 10394 + PS_pyruv_trans
CAZyme MGYG000000635_13 MGYG000000635_13_7 10980 12143 - GT2
CAZyme MGYG000000635_13 MGYG000000635_13_8 12153 13220 - GT2
TC MGYG000000635_13 MGYG000000635_13_9 13411 14418 + 9.B.97.6.3
NULL(UNKNOWN) MGYG000000635_13 MGYG000000635_13_10 14443 16164 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000000635_13 MGYG000000635_13_11 16165 17448 - GT2
CAZyme MGYG000000635_13 MGYG000000635_13_12 17702 20089 + CBM13 | CBM13
pfam MGYG000000635_13 MGYG000000635_13_13 20202 22307 + DUF6541
CAZyme MGYG000000635_13 MGYG000000635_13_14 22416 23609 - GT4
CAZyme MGYG000000635_13 MGYG000000635_13_15 23764 24459 + GT2
pfam MGYG000000635_13 MGYG000000635_13_16 24460 24870 + DUF2304
pfam MGYG000000635_13 MGYG000000635_13_17 24872 27136 + LicD
CAZyme MGYG000000635_13 MGYG000000635_13_18 27136 28263 + GT4
Gene ID: MGYG000000635_13_1
Type: TC
Location: 159 - 1985 (+)
Gene ID: MGYG000000635_13_2
Type: CAZyme
Location: 2120 - 3235 (-)
Gene ID: MGYG000000635_13_3
Type: TC
Location: 3243 - 5135 (-)
Gene ID: MGYG000000635_13_4
Type: TC
Location: 5145 - 5936 (-)
Gene ID: MGYG000000635_13_5
Type: CAZyme
Location: 6222 - 7751 (+)
Gene ID: MGYG000000635_13_6
Type: pfam
Location: 7908 - 10394 (+)
Gene ID: MGYG000000635_13_7
Type: CAZyme
Location: 10980 - 12143 (-)
Gene ID: MGYG000000635_13_8
Type: CAZyme
Location: 12153 - 13220 (-)
Gene ID: MGYG000000635_13_9
Type: TC
Location: 13411 - 14418 (+)
Gene ID: MGYG000000635_13_10
Type:
Location: 14443 - 16164 (+)
Gene ID: MGYG000000635_13_11
Type: CAZyme
Location: 16165 - 17448 (-)
Gene ID: MGYG000000635_13_12
Type: CAZyme
Location: 17702 - 20089 (+)
Gene ID: MGYG000000635_13_13
Type: pfam
Location: 20202 - 22307 (+)
Gene ID: MGYG000000635_13_14
Type: CAZyme
Location: 22416 - 23609 (-)
Gene ID: MGYG000000635_13_15
Type: CAZyme
Location: 23764 - 24459 (+)
Gene ID: MGYG000000635_13_16
Type: pfam
Location: 24460 - 24870 (+)
Gene ID: MGYG000000635_13_17
Type: pfam
Location: 24872 - 27136 (+)
Gene ID: MGYG000000635_13_18
Type: CAZyme
Location: 27136 - 28263 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000635_13_2 vegan > omnivore 1.84499 0.01067
MGYG000000635_13_2 vegetarian > omnivore 2.55579 0.00123
MGYG000000635_13_4 vegetarian > omnivore 2.04461 0.00123
MGYG000000635_13_4 vegetarian > vegan 1.64513 0.01301
MGYG000000635_13_13 vegetarian > omnivore 2.10930 0.00123
MGYG000000635_13_13 vegetarian > vegan 1.64301 0.01301
MGYG000000635_13_15 vegan > omnivore 1.96374 0.03052
MGYG000000635_13_15 vegetarian > omnivore 3.26700 0.00123
MGYG000000635_13_15 vegetarian > vegan 1.30326 0.01301
MGYG000000635_13_16 vegan > omnivore 1.52005 0.03052
MGYG000000635_13_16 vegetarian > omnivore 3.07009 0.00123
MGYG000000635_13_16 vegetarian > vegan 1.55004 0.01301
MGYG000000635_13_17 vegan > omnivore 1.66272 0.03052
MGYG000000635_13_17 vegetarian > omnivore 2.37503 0.00123
MGYG000000635_13_18 vegetarian > omnivore 1.77217 0.00123

🧭 Explore Read Mapping of CGC

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