Cluster: MGYG000000634_CGC15
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 4
- Substrate:
- Genome ID: MGYG000000634
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000634_55 | MGYG000000634_55_1 | 1 | 2136 | + | GT41 |
| pfam | MGYG000000634_55 | MGYG000000634_55_2 | 2180 | 3049 | - | UPF0020 | Cons_hypoth95 | MTS | PrmA | Methyltransf_12 | Methyltransf_15 | Methyltransf_18 | Methyltransf_25 | Methyltransf_31 |
| pfam | MGYG000000634_55 | MGYG000000634_55_3 | 3036 | 3824 | - | GCV_T |
| CAZyme | MGYG000000634_55 | MGYG000000634_55_4 | 3821 | 5056 | - | GT30 |
| CAZyme | MGYG000000634_55 | MGYG000000634_55_5 | 5090 | 6073 | - | GT9 |
| CAZyme | MGYG000000634_55 | MGYG000000634_55_6 | 6113 | 6871 | + | GT2 |
| TC | MGYG000000634_55 | MGYG000000634_55_7 | 6982 | 8223 | - | 9.B.67.7.3 |
Gene ID: MGYG000000634_55_1
Type: CAZyme
Location: 1 - 2136 (+)
Type: CAZyme
Location: 1 - 2136 (+)
Gene ID: MGYG000000634_55_2
Type: pfam
Location: 2180 - 3049 (-)
Type: pfam
Location: 2180 - 3049 (-)
Gene ID: MGYG000000634_55_3
Type: pfam
Location: 3036 - 3824 (-)
Type: pfam
Location: 3036 - 3824 (-)
Gene ID: MGYG000000634_55_4
Type: CAZyme
Location: 3821 - 5056 (-)
Type: CAZyme
Location: 3821 - 5056 (-)
Gene ID: MGYG000000634_55_5
Type: CAZyme
Location: 5090 - 6073 (-)
Type: CAZyme
Location: 5090 - 6073 (-)
Gene ID: MGYG000000634_55_6
Type: CAZyme
Location: 6113 - 6871 (+)
Type: CAZyme
Location: 6113 - 6871 (+)
Gene ID: MGYG000000634_55_7
Type: TC
Location: 6982 - 8223 (-)
Type: TC
Location: 6982 - 8223 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Rhodocyclaceae
Genus
SFHR01
Species
SFHR01 sp934271525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.