Cluster: MGYG000000634_CGC11
🧬 Cluster Details
- Gene Count: 14
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000634
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000634_23 | MGYG000000634_23_4 | 3581 | 5230 | - | 2.A.53.3.11 |
| pfam | MGYG000000634_23 | MGYG000000634_23_5 | 5324 | 6358 | + | DHO_dh |
| TC | MGYG000000634_23 | MGYG000000634_23_6 | 6355 | 6936 | + | 3.D.6.1.4 |
| TC | MGYG000000634_23 | MGYG000000634_23_7 | 6933 | 7514 | + | 3.D.6.1.4 |
| TC | MGYG000000634_23 | MGYG000000634_23_8 | 7511 | 8989 | + | 3.D.6.1.4 |
| TC | MGYG000000634_23 | MGYG000000634_23_9 | 9007 | 9987 | + | 3.D.6.1.4 |
| TC | MGYG000000634_23 | MGYG000000634_23_10 | 9984 | 10670 | + | 3.D.6.1.4 |
| TC | MGYG000000634_23 | MGYG000000634_23_11 | 10703 | 11347 | + | 3.D.6.1.4 |
| TC | MGYG000000634_23 | MGYG000000634_23_12 | 11585 | 12973 | - | 3.D.2.2.2 |
| TC | MGYG000000634_23 | MGYG000000634_23_13 | 12975 | 13283 | - | 3.D.2.2.2 |
| TC | MGYG000000634_23 | MGYG000000634_23_14 | 13287 | 14411 | - | 3.D.2.2.2 |
| pfam | MGYG000000634_23 | MGYG000000634_23_15 | 14555 | 15781 | + | Iso_dh |
| NULL(UNKNOWN) | MGYG000000634_23 | MGYG000000634_23_16 | 15788 | 15949 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000634_23 | MGYG000000634_23_17 | 15946 | 16929 | - | GT2 |
Gene ID: MGYG000000634_23_4
Type: TC
Location: 3581 - 5230 (-)
Type: TC
Location: 3581 - 5230 (-)
Gene ID: MGYG000000634_23_5
Type: pfam
Location: 5324 - 6358 (+)
Type: pfam
Location: 5324 - 6358 (+)
Gene ID: MGYG000000634_23_6
Type: TC
Location: 6355 - 6936 (+)
Type: TC
Location: 6355 - 6936 (+)
Gene ID: MGYG000000634_23_7
Type: TC
Location: 6933 - 7514 (+)
Type: TC
Location: 6933 - 7514 (+)
Gene ID: MGYG000000634_23_8
Type: TC
Location: 7511 - 8989 (+)
Type: TC
Location: 7511 - 8989 (+)
Gene ID: MGYG000000634_23_9
Type: TC
Location: 9007 - 9987 (+)
Type: TC
Location: 9007 - 9987 (+)
Gene ID: MGYG000000634_23_10
Type: TC
Location: 9984 - 10670 (+)
Type: TC
Location: 9984 - 10670 (+)
Gene ID: MGYG000000634_23_11
Type: TC
Location: 10703 - 11347 (+)
Type: TC
Location: 10703 - 11347 (+)
Gene ID: MGYG000000634_23_12
Type: TC
Location: 11585 - 12973 (-)
Type: TC
Location: 11585 - 12973 (-)
Gene ID: MGYG000000634_23_13
Type: TC
Location: 12975 - 13283 (-)
Type: TC
Location: 12975 - 13283 (-)
Gene ID: MGYG000000634_23_14
Type: TC
Location: 13287 - 14411 (-)
Type: TC
Location: 13287 - 14411 (-)
Gene ID: MGYG000000634_23_15
Type: pfam
Location: 14555 - 15781 (+)
Type: pfam
Location: 14555 - 15781 (+)
Gene ID: MGYG000000634_23_16
Type:
Location: 15788 - 15949 (+)
Type:
Location: 15788 - 15949 (+)
Gene ID: MGYG000000634_23_17
Type: CAZyme
Location: 15946 - 16929 (-)
Type: CAZyme
Location: 15946 - 16929 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Burkholderiales
Family
Rhodocyclaceae
Genus
SFHR01
Species
SFHR01 sp934271525
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.