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Cluster: MGYG000000623_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000623_5 MGYG000000623_5_20 23008 23889 + 3.A.1.1.45
TC MGYG000000623_5 MGYG000000623_5_21 23889 24749 + 3.A.1.1.45
CAZyme MGYG000000623_5 MGYG000000623_5_22 24825 26318 + GH32
CAZyme MGYG000000623_5 MGYG000000623_5_23 26421 28271 + GH13_4
pfam MGYG000000623_5 MGYG000000623_5_24 28366 28947 - Acetyltransf_1 | Acetyltransf_4 | Acetyltransf_7 | Acetyltransf_10
NULL(UNKNOWN) MGYG000000623_5 MGYG000000623_5_25 28994 30151 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000000623_5 MGYG000000623_5_26 30526 32946 + 8.A.59.4.2
Gene ID: MGYG000000623_5_20
Type: TC
Location: 23008 - 23889 (+)
Gene ID: MGYG000000623_5_21
Type: TC
Location: 23889 - 24749 (+)
Gene ID: MGYG000000623_5_22
Type: CAZyme
Location: 24825 - 26318 (+)
Gene ID: MGYG000000623_5_23
Type: CAZyme
Location: 26421 - 28271 (+)
Gene ID: MGYG000000623_5_24
Type: pfam
Location: 28366 - 28947 (-)
Gene ID: MGYG000000623_5_25
Type:
Location: 28994 - 30151 (-)
Gene ID: MGYG000000623_5_26
Type: TC
Location: 30526 - 32946 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000623_5_24 vegan > omnivore 2.20934 0.01144
MGYG000000623_5_24 vegetarian > omnivore 2.90977 0.00804

🧭 Explore Read Mapping of CGC

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