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Cluster: MGYG000000623_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000623_4 MGYG000000623_4_46 51450 53333 - 1.A.33.1.4
pfam MGYG000000623_4 MGYG000000623_4_47 53381 54055 - GrpE
TF MGYG000000623_4 MGYG000000623_4_48 54072 55112 - 0043758
TC MGYG000000623_4 MGYG000000623_4_49 55412 57283 + 8.A.59.2.1
TF MGYG000000623_4 MGYG000000623_4_50 57261 58883 + HTH_AraC
STP MGYG000000623_4 MGYG000000623_4_51 59029 60309 + SBP_bac_1
TC MGYG000000623_4 MGYG000000623_4_52 60376 61242 + 3.A.1.1.37
TC MGYG000000623_4 MGYG000000623_4_53 61255 62097 + 3.A.1.1.18
CAZyme MGYG000000623_4 MGYG000000623_4_54 62112 64298 + GH2
Gene ID: MGYG000000623_4_46
Type: TC
Location: 51450 - 53333 (-)
Gene ID: MGYG000000623_4_47
Type: pfam
Location: 53381 - 54055 (-)
Gene ID: MGYG000000623_4_48
Type: TF
Location: 54072 - 55112 (-)
Gene ID: MGYG000000623_4_49
Type: TC
Location: 55412 - 57283 (+)
Gene ID: MGYG000000623_4_50
Type: TF
Location: 57261 - 58883 (+)
Gene ID: MGYG000000623_4_51
Type: STP
Location: 59029 - 60309 (+)
Gene ID: MGYG000000623_4_52
Type: TC
Location: 60376 - 61242 (+)
Gene ID: MGYG000000623_4_53
Type: TC
Location: 61255 - 62097 (+)
Gene ID: MGYG000000623_4_54
Type: CAZyme
Location: 62112 - 64298 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000623_4_51 vegan > omnivore 1.09108 0.01144

🧭 Explore Read Mapping of CGC

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