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Cluster: MGYG000000623_CGC25

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000623_75 MGYG000000623_75_1 2 355 - 3.A.1.134.8
TF MGYG000000623_75 MGYG000000623_75_2 584 1438 - HTH_AraC | HTH_AraC
CAZyme MGYG000000623_75 MGYG000000623_75_3 1705 3867 + GH112
TF MGYG000000623_75 MGYG000000623_75_4 4007 5182 - HTH_AraC | HTH_AraC
TC MGYG000000623_75 MGYG000000623_75_5 5184 6986 - 8.A.59.2.1
TC MGYG000000623_75 MGYG000000623_75_6 7293 8639 + 3.A.1.1.18
TC MGYG000000623_75 MGYG000000623_75_7 8827 9708 + 3.A.1.1.18
TC MGYG000000623_75 MGYG000000623_75_8 9719 10546 + 3.A.1.1.25
CAZyme MGYG000000623_75 MGYG000000623_75_9 10593 12032 + GH29
CAZyme MGYG000000623_75 MGYG000000623_75_10 12060 14255 + GH95
Gene ID: MGYG000000623_75_1
Type: TC
Location: 2 - 355 (-)
Gene ID: MGYG000000623_75_2
Type: TF
Location: 584 - 1438 (-)
Gene ID: MGYG000000623_75_3
Type: CAZyme
Location: 1705 - 3867 (+)
Gene ID: MGYG000000623_75_4
Type: TF
Location: 4007 - 5182 (-)
Gene ID: MGYG000000623_75_5
Type: TC
Location: 5184 - 6986 (-)
Gene ID: MGYG000000623_75_6
Type: TC
Location: 7293 - 8639 (+)
Gene ID: MGYG000000623_75_7
Type: TC
Location: 8827 - 9708 (+)
Gene ID: MGYG000000623_75_8
Type: TC
Location: 9719 - 10546 (+)
Gene ID: MGYG000000623_75_9
Type: CAZyme
Location: 10593 - 12032 (+)
Gene ID: MGYG000000623_75_10
Type: CAZyme
Location: 12060 - 14255 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000623_75_1 vegetarian > vegan 1.16941 0.01721
MGYG000000623_75_5 vegan > omnivore 1.02089 0.01144
MGYG000000623_75_6 vegan > omnivore 1.07601 0.01144
MGYG000000623_75_7 vegan > omnivore 1.06930 0.01144
MGYG000000623_75_8 vegan > omnivore 1.02821 0.01144

🧭 Explore Read Mapping of CGC

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