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Cluster: MGYG000000623_CGC16

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000623_23 MGYG000000623_23_18 22720 24462 - 3.A.1.135.5
TC MGYG000000623_23 MGYG000000623_23_19 24462 26192 - 3.A.1.135.7
CAZyme MGYG000000623_23 MGYG000000623_23_20 26189 27712 - GH77
TC MGYG000000623_23 MGYG000000623_23_21 27958 29613 - 3.A.1.5.2
TC MGYG000000623_23 MGYG000000623_23_22 29785 30798 - 3.A.1.5.20
TC MGYG000000623_23 MGYG000000623_23_23 30799 31806 - 3.A.1.5.2
TC MGYG000000623_23 MGYG000000623_23_24 31823 33187 - 3.A.1.5.2
TC MGYG000000623_23 MGYG000000623_23_25 33184 34128 - 3.A.1.5.2
Gene ID: MGYG000000623_23_18
Type: TC
Location: 22720 - 24462 (-)
Gene ID: MGYG000000623_23_19
Type: TC
Location: 24462 - 26192 (-)
Gene ID: MGYG000000623_23_20
Type: CAZyme
Location: 26189 - 27712 (-)
Gene ID: MGYG000000623_23_21
Type: TC
Location: 27958 - 29613 (-)
Gene ID: MGYG000000623_23_22
Type: TC
Location: 29785 - 30798 (-)
Gene ID: MGYG000000623_23_23
Type: TC
Location: 30799 - 31806 (-)
Gene ID: MGYG000000623_23_24
Type: TC
Location: 31823 - 33187 (-)
Gene ID: MGYG000000623_23_25
Type: TC
Location: 33184 - 34128 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000623_23_21 vegan > omnivore 1.08163 0.01144
MGYG000000623_23_22 vegan > omnivore 1.18014 0.01144
MGYG000000623_23_24 vegan > omnivore 1.44487 0.01144

🧭 Explore Read Mapping of CGC

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