Cluster: MGYG000000613_CGC5
🧬 Cluster Details
- Gene Count: 10
- CAZyme Count: 5
- Substrate:
- Genome ID: MGYG000000613
- CGC Family ID: CGCFAM_01301
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000613_55 | MGYG000000613_55_3 | 1672 | 3813 | + | GT2 | GT4 |
| pfam | MGYG000000613_55 | MGYG000000613_55_4 | 3963 | 4397 | + | CTP_transf_like |
| CAZyme | MGYG000000613_55 | MGYG000000613_55_5 | 4390 | 5409 | + | GT2 |
| CAZyme | MGYG000000613_55 | MGYG000000613_55_6 | 5421 | 8021 | + | GT2 |
| pfam | MGYG000000613_55 | MGYG000000613_55_7 | 8084 | 9223 | - | Acyl_transf_3 |
| CAZyme | MGYG000000613_55 | MGYG000000613_55_8 | 9380 | 10438 | + | GT2 |
| TC | MGYG000000613_55 | MGYG000000613_55_9 | 10557 | 11324 | + | 3.A.1.103.6 |
| TC | MGYG000000613_55 | MGYG000000613_55_10 | 11334 | 12743 | + | 3.A.1.103.5 |
| TC | MGYG000000613_55 | MGYG000000613_55_11 | 12815 | 14329 | - | 9.B.18.1.1 |
| CAZyme | MGYG000000613_55 | MGYG000000613_55_12 | 14385 | 15569 | + | GT4 |
Gene ID: MGYG000000613_55_3
Type: CAZyme
Location: 1672 - 3813 (+)
Type: CAZyme
Location: 1672 - 3813 (+)
Gene ID: MGYG000000613_55_4
Type: pfam
Location: 3963 - 4397 (+)
Type: pfam
Location: 3963 - 4397 (+)
Gene ID: MGYG000000613_55_5
Type: CAZyme
Location: 4390 - 5409 (+)
Type: CAZyme
Location: 4390 - 5409 (+)
Gene ID: MGYG000000613_55_6
Type: CAZyme
Location: 5421 - 8021 (+)
Type: CAZyme
Location: 5421 - 8021 (+)
Gene ID: MGYG000000613_55_7
Type: pfam
Location: 8084 - 9223 (-)
Type: pfam
Location: 8084 - 9223 (-)
Gene ID: MGYG000000613_55_8
Type: CAZyme
Location: 9380 - 10438 (+)
Type: CAZyme
Location: 9380 - 10438 (+)
Gene ID: MGYG000000613_55_9
Type: TC
Location: 10557 - 11324 (+)
Type: TC
Location: 10557 - 11324 (+)
Gene ID: MGYG000000613_55_10
Type: TC
Location: 11334 - 12743 (+)
Type: TC
Location: 11334 - 12743 (+)
Gene ID: MGYG000000613_55_11
Type: TC
Location: 12815 - 14329 (-)
Type: TC
Location: 12815 - 14329 (-)
Gene ID: MGYG000000613_55_12
Type: CAZyme
Location: 14385 - 15569 (+)
Type: CAZyme
Location: 14385 - 15569 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
UMGS124
Genus
UMGS124
Species
UMGS124 sp934654475
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000613_55_9 | vegetarian > omnivore | 1.54975 | 0.01332 |
| MGYG000000613_55_9 | vegetarian > vegan | 3.20399 | 0.00973 |
| MGYG000000613_55_12 | vegetarian > omnivore | 19.57463 | 0.01332 |
| MGYG000000613_55_12 | vegetarian > vegan | 4.20623 | 0.00973 |