Cluster: MGYG000000599_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000599
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000599_28 | MGYG000000599_28_18 | 12226 | 12708 | - | 4.A.6.1.5 |
| pfam | MGYG000000599_28 | MGYG000000599_28_19 | 13153 | 13626 | - | DUF386 |
| CAZyme | MGYG000000599_28 | MGYG000000599_28_20 | 13659 | 14828 | - | CE9 |
| TF | MGYG000000599_28 | MGYG000000599_28_21 | 14972 | 15703 | - | GntR |
| TC | MGYG000000599_28 | MGYG000000599_28_22 | 15936 | 17423 | - | 4.A.1.1.7 |
Gene ID: MGYG000000599_28_18
Type: TC
Location: 12226 - 12708 (-)
Type: TC
Location: 12226 - 12708 (-)
Gene ID: MGYG000000599_28_19
Type: pfam
Location: 13153 - 13626 (-)
Type: pfam
Location: 13153 - 13626 (-)
Gene ID: MGYG000000599_28_20
Type: CAZyme
Location: 13659 - 14828 (-)
Type: CAZyme
Location: 13659 - 14828 (-)
Gene ID: MGYG000000599_28_21
Type: TF
Location: 14972 - 15703 (-)
Type: TF
Location: 14972 - 15703 (-)
Gene ID: MGYG000000599_28_22
Type: TC
Location: 15936 - 17423 (-)
Type: TC
Location: 15936 - 17423 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902464175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
Differentially Abundant Genes
| Gene ID | Condition Pair | log2FC | FDR P-value |
|---|---|---|---|
| MGYG000000599_28_21 | vegetarian > vegan | 3.12156 | 0.02517 |