Cluster: MGYG000000599_CGC5
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000599
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000599_26 | MGYG000000599_26_3 | 2013 | 4340 | - | 9.A.8.1.6 |
| TC | MGYG000000599_26 | MGYG000000599_26_4 | 4464 | 4685 | - | 9.A.8.1.6 |
| STP | MGYG000000599_26 | MGYG000000599_26_5 | 4725 | 4967 | - | FeoA |
| STP | MGYG000000599_26 | MGYG000000599_26_6 | 5157 | 5405 | - | PTS-HPr |
| TC | MGYG000000599_26 | MGYG000000599_26_7 | 5827 | 7290 | - | 2.A.3.7.4 |
| NULL(UNKNOWN) | MGYG000000599_26 | MGYG000000599_26_8 | 7444 | 7899 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| CAZyme | MGYG000000599_26 | MGYG000000599_26_9 | 7903 | 10911 | - | GH2 |
Gene ID: MGYG000000599_26_3
Type: TC
Location: 2013 - 4340 (-)
Type: TC
Location: 2013 - 4340 (-)
Gene ID: MGYG000000599_26_4
Type: TC
Location: 4464 - 4685 (-)
Type: TC
Location: 4464 - 4685 (-)
Gene ID: MGYG000000599_26_5
Type: STP
Location: 4725 - 4967 (-)
Type: STP
Location: 4725 - 4967 (-)
Gene ID: MGYG000000599_26_6
Type: STP
Location: 5157 - 5405 (-)
Type: STP
Location: 5157 - 5405 (-)
Gene ID: MGYG000000599_26_7
Type: TC
Location: 5827 - 7290 (-)
Type: TC
Location: 5827 - 7290 (-)
Gene ID: MGYG000000599_26_8
Type:
Location: 7444 - 7899 (-)
Type:
Location: 7444 - 7899 (-)
Gene ID: MGYG000000599_26_9
Type: CAZyme
Location: 7903 - 10911 (-)
Type: CAZyme
Location: 7903 - 10911 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902464175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.