Cluster: MGYG000000599_CGC17
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate: host glycan
- Genome ID: MGYG000000599
- CGC Family ID: CGCFAM_00014
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000599_129 | MGYG000000599_129_1 | 1 | 1365 | + | GH1 |
| TF | MGYG000000599_129 | MGYG000000599_129_2 | 1575 | 2576 | - | LacI |
| TC | MGYG000000599_129 | MGYG000000599_129_3 | 2861 | 3961 | + | 4.A.3.1.1 |
| TC | MGYG000000599_129 | MGYG000000599_129_4 | 3969 | 4442 | + | 4.A.3.1.1 |
Gene ID: MGYG000000599_129_1
Type: CAZyme
Location: 1 - 1365 (+)
Type: CAZyme
Location: 1 - 1365 (+)
Gene ID: MGYG000000599_129_2
Type: TF
Location: 1575 - 2576 (-)
Type: TF
Location: 1575 - 2576 (-)
Gene ID: MGYG000000599_129_3
Type: TC
Location: 2861 - 3961 (+)
Type: TC
Location: 2861 - 3961 (+)
Gene ID: MGYG000000599_129_4
Type: TC
Location: 3969 - 4442 (+)
Type: TC
Location: 3969 - 4442 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp902464175
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.