Cluster: MGYG000000598_CGC2
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000598
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000598_1 | MGYG000000598_1_113 | 139389 | 139727 | - | 4.A.3.1.2 |
| TF | MGYG000000598_1 | MGYG000000598_1_114 | 139942 | 140946 | - | LacI |
| TC | MGYG000000598_1 | MGYG000000598_1_115 | 141303 | 143078 | + | 4.A.3.1.1 |
| CAZyme | MGYG000000598_1 | MGYG000000598_1_116 | 143275 | 144714 | + | GH1 |
| TF | MGYG000000598_1 | MGYG000000598_1_117 | 145141 | 146151 | - | LacI |
| TC | MGYG000000598_1 | MGYG000000598_1_118 | 146428 | 147822 | + | 4.A.3.1.1 |
Gene ID: MGYG000000598_1_113
Type: TC
Location: 139389 - 139727 (-)
Type: TC
Location: 139389 - 139727 (-)
Gene ID: MGYG000000598_1_114
Type: TF
Location: 139942 - 140946 (-)
Type: TF
Location: 139942 - 140946 (-)
Gene ID: MGYG000000598_1_115
Type: TC
Location: 141303 - 143078 (+)
Type: TC
Location: 141303 - 143078 (+)
Gene ID: MGYG000000598_1_116
Type: CAZyme
Location: 143275 - 144714 (+)
Type: CAZyme
Location: 143275 - 144714 (+)
Gene ID: MGYG000000598_1_117
Type: TF
Location: 145141 - 146151 (-)
Type: TF
Location: 145141 - 146151 (-)
Gene ID: MGYG000000598_1_118
Type: TC
Location: 146428 - 147822 (+)
Type: TC
Location: 146428 - 147822 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp937937635
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.