Cluster: MGYG000000595_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000595
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000595_12 | MGYG000000595_12_20 | 20567 | 22060 | - | 1.I.1.1.3 |
| CAZyme | MGYG000000595_12 | MGYG000000595_12_21 | 22199 | 23665 | - | GT28 |
| pfam | MGYG000000595_12 | MGYG000000595_12_22 | 23909 | 25240 | + | TRAM | tRNA_U5-meth_tr | tRNA_U5-meth_tr |
| pfam | MGYG000000595_12 | MGYG000000595_12_23 | 25422 | 25811 | - | GtrA_DPMS_TM |
| CAZyme | MGYG000000595_12 | MGYG000000595_12_24 | 25995 | 26948 | + | GT2 |
| TC | MGYG000000595_12 | MGYG000000595_12_25 | 27972 | 28505 | + | 3.D.1.8.1 |
Gene ID: MGYG000000595_12_20
Type: TC
Location: 20567 - 22060 (-)
Type: TC
Location: 20567 - 22060 (-)
Gene ID: MGYG000000595_12_21
Type: CAZyme
Location: 22199 - 23665 (-)
Type: CAZyme
Location: 22199 - 23665 (-)
Gene ID: MGYG000000595_12_22
Type: pfam
Location: 23909 - 25240 (+)
Type: pfam
Location: 23909 - 25240 (+)
Gene ID: MGYG000000595_12_23
Type: pfam
Location: 25422 - 25811 (-)
Type: pfam
Location: 25422 - 25811 (-)
Gene ID: MGYG000000595_12_24
Type: CAZyme
Location: 25995 - 26948 (+)
Type: CAZyme
Location: 25995 - 26948 (+)
Gene ID: MGYG000000595_12_25
Type: TC
Location: 27972 - 28505 (+)
Type: TC
Location: 27972 - 28505 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Eggerthellaceae
Genus
Aphodovivens
Species
Aphodovivens avicola
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.