Cluster: MGYG000000579_CGC19
🧬 Cluster Details
- Gene Count: 9
- CAZyme Count: 1
- Substrate:
- Genome ID: MGYG000000579
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | MGYG000000579_21 | MGYG000000579_21_31 | 36139 | 37539 | + | GH1 |
| TC | MGYG000000579_21 | MGYG000000579_21_32 | 37660 | 39012 | + | 4.A.3.2.2 |
| TC | MGYG000000579_21 | MGYG000000579_21_33 | 39167 | 39469 | + | 4.A.3.2.9 |
| pfam | MGYG000000579_21 | MGYG000000579_21_34 | 39479 | 39811 | + | PTS_IIA |
| sulfatase | MGYG000000579_21 | MGYG000000579_21_35 | 39937 | 40620 | + | S1_11 |
| TC | MGYG000000579_21 | MGYG000000579_21_36 | 40630 | 40938 | + | 4.A.3.2.8 |
| pfam | MGYG000000579_21 | MGYG000000579_21_37 | 41126 | 42079 | + | ROK |
| pfam | MGYG000000579_21 | MGYG000000579_21_38 | 42245 | 43168 | + | DHH | DHHA2 |
| TC | MGYG000000579_21 | MGYG000000579_21_39 | 43436 | 44794 | + | 2.A.33.1.1 |
Gene ID: MGYG000000579_21_31
Type: CAZyme
Location: 36139 - 37539 (+)
Type: CAZyme
Location: 36139 - 37539 (+)
Gene ID: MGYG000000579_21_32
Type: TC
Location: 37660 - 39012 (+)
Type: TC
Location: 37660 - 39012 (+)
Gene ID: MGYG000000579_21_33
Type: TC
Location: 39167 - 39469 (+)
Type: TC
Location: 39167 - 39469 (+)
Gene ID: MGYG000000579_21_34
Type: pfam
Location: 39479 - 39811 (+)
Type: pfam
Location: 39479 - 39811 (+)
Gene ID: MGYG000000579_21_35
Type: sulfatase
Location: 39937 - 40620 (+)
Type: sulfatase
Location: 39937 - 40620 (+)
Gene ID: MGYG000000579_21_36
Type: TC
Location: 40630 - 40938 (+)
Type: TC
Location: 40630 - 40938 (+)
Gene ID: MGYG000000579_21_37
Type: pfam
Location: 41126 - 42079 (+)
Type: pfam
Location: 41126 - 42079 (+)
Gene ID: MGYG000000579_21_38
Type: pfam
Location: 42245 - 43168 (+)
Type: pfam
Location: 42245 - 43168 (+)
Gene ID: MGYG000000579_21_39
Type: TC
Location: 43436 - 44794 (+)
Type: TC
Location: 43436 - 44794 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp937995345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.