Cluster: MGYG000000579_CGC16
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000579
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000579_18 | MGYG000000579_18_17 | 20765 | 21103 | - | 4.A.3.1.2 |
| TF | MGYG000000579_18 | MGYG000000579_18_18 | 21318 | 22322 | - | LacI |
| TC | MGYG000000579_18 | MGYG000000579_18_19 | 22679 | 24454 | + | 4.A.3.1.1 |
| CAZyme | MGYG000000579_18 | MGYG000000579_18_20 | 24525 | 25964 | + | GH1 |
| TF | MGYG000000579_18 | MGYG000000579_18_21 | 26334 | 27344 | - | LacI |
| TC | MGYG000000579_18 | MGYG000000579_18_22 | 27620 | 29377 | + | 4.A.3.1.1 |
| CAZyme | MGYG000000579_18 | MGYG000000579_18_23 | 29453 | 30874 | + | GH1 |
Gene ID: MGYG000000579_18_17
Type: TC
Location: 20765 - 21103 (-)
Type: TC
Location: 20765 - 21103 (-)
Gene ID: MGYG000000579_18_18
Type: TF
Location: 21318 - 22322 (-)
Type: TF
Location: 21318 - 22322 (-)
Gene ID: MGYG000000579_18_19
Type: TC
Location: 22679 - 24454 (+)
Type: TC
Location: 22679 - 24454 (+)
Gene ID: MGYG000000579_18_20
Type: CAZyme
Location: 24525 - 25964 (+)
Type: CAZyme
Location: 24525 - 25964 (+)
Gene ID: MGYG000000579_18_21
Type: TF
Location: 26334 - 27344 (-)
Type: TF
Location: 26334 - 27344 (-)
Gene ID: MGYG000000579_18_22
Type: TC
Location: 27620 - 29377 (+)
Type: TC
Location: 27620 - 29377 (+)
Gene ID: MGYG000000579_18_23
Type: CAZyme
Location: 29453 - 30874 (+)
Type: CAZyme
Location: 29453 - 30874 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Actinomycetota
Class
Coriobacteriia
Order
Coriobacteriales
Family
Coriobacteriaceae
Genus
Collinsella
Species
Collinsella sp937995345
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.