Cluster: MGYG000000576_CGC12
🧬 Cluster Details
- Gene Count: 12
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000576
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000576_29 | MGYG000000576_29_8 | 8049 | 8885 | - | 3.A.1.1.27 |
| TC | MGYG000000576_29 | MGYG000000576_29_9 | 8885 | 10255 | - | 3.A.1.1.27 |
| TC | MGYG000000576_29 | MGYG000000576_29_10 | 10390 | 11643 | - | 3.A.1.1.27 |
| TF | MGYG000000576_29 | MGYG000000576_29_11 | 11921 | 12943 | + | LacI |
| CAZyme | MGYG000000576_29 | MGYG000000576_29_12 | 13082 | 14575 | + | GH77 |
| CAZyme | MGYG000000576_29 | MGYG000000576_29_13 | 14586 | 16850 | + | GT35 |
| TC | MGYG000000576_29 | MGYG000000576_29_14 | 17035 | 17850 | + | 3.A.1.3.3 |
| STP | MGYG000000576_29 | MGYG000000576_29_15 | 17969 | 19078 | + | Aminotran_1_2 |
| TC | MGYG000000576_29 | MGYG000000576_29_16 | 19166 | 19981 | + | 3.A.1.3.27 |
| pfam | MGYG000000576_29 | MGYG000000576_29_17 | 20076 | 20570 | + | CxxCxxCC |
| pfam | MGYG000000576_29 | MGYG000000576_29_18 | 20692 | 20868 | + | Ribosomal_S21 |
| TC | MGYG000000576_29 | MGYG000000576_29_19 | 20977 | 21354 | - | 1.A.22.1.5 |
Gene ID: MGYG000000576_29_8
Type: TC
Location: 8049 - 8885 (-)
Type: TC
Location: 8049 - 8885 (-)
Gene ID: MGYG000000576_29_9
Type: TC
Location: 8885 - 10255 (-)
Type: TC
Location: 8885 - 10255 (-)
Gene ID: MGYG000000576_29_10
Type: TC
Location: 10390 - 11643 (-)
Type: TC
Location: 10390 - 11643 (-)
Gene ID: MGYG000000576_29_11
Type: TF
Location: 11921 - 12943 (+)
Type: TF
Location: 11921 - 12943 (+)
Gene ID: MGYG000000576_29_12
Type: CAZyme
Location: 13082 - 14575 (+)
Type: CAZyme
Location: 13082 - 14575 (+)
Gene ID: MGYG000000576_29_13
Type: CAZyme
Location: 14586 - 16850 (+)
Type: CAZyme
Location: 14586 - 16850 (+)
Gene ID: MGYG000000576_29_14
Type: TC
Location: 17035 - 17850 (+)
Type: TC
Location: 17035 - 17850 (+)
Gene ID: MGYG000000576_29_15
Type: STP
Location: 17969 - 19078 (+)
Type: STP
Location: 17969 - 19078 (+)
Gene ID: MGYG000000576_29_16
Type: TC
Location: 19166 - 19981 (+)
Type: TC
Location: 19166 - 19981 (+)
Gene ID: MGYG000000576_29_17
Type: pfam
Location: 20076 - 20570 (+)
Type: pfam
Location: 20076 - 20570 (+)
Gene ID: MGYG000000576_29_18
Type: pfam
Location: 20692 - 20868 (+)
Type: pfam
Location: 20692 - 20868 (+)
Gene ID: MGYG000000576_29_19
Type: TC
Location: 20977 - 21354 (-)
Type: TC
Location: 20977 - 21354 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sp015594605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.