Cluster: MGYG000000576_CGC1
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 2
- Substrate:
- Genome ID: MGYG000000576
- CGC Family ID: CGCFAM_10098
- Continent: Africa
- Source Study: Almeida et al., 2021 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | MGYG000000576_1 | MGYG000000576_1_43 | 45978 | 46706 | - | 9.B.120.1.1 |
| peptidase | MGYG000000576_1 | MGYG000000576_1_44 | 46756 | 47841 | - | M24.006 |
| TF | MGYG000000576_1 | MGYG000000576_1_45 | 48056 | 49060 | + | LacI |
| CAZyme | MGYG000000576_1 | MGYG000000576_1_46 | 49174 | 50172 | + | GT4 |
| CAZyme | MGYG000000576_1 | MGYG000000576_1_47 | 50174 | 51511 | + | GT4 |
| pfam | MGYG000000576_1 | MGYG000000576_1_48 | 51851 | 53803 | + | tRNA-synt_2b | TGS | HGTP_anticodon | tRNA_SAD |
| TC | MGYG000000576_1 | MGYG000000576_1_49 | 53947 | 54807 | + | 3.A.1.130.1 |
Gene ID: MGYG000000576_1_43
Type: TC
Location: 45978 - 46706 (-)
Type: TC
Location: 45978 - 46706 (-)
Gene ID: MGYG000000576_1_44
Type: peptidase
Location: 46756 - 47841 (-)
Type: peptidase
Location: 46756 - 47841 (-)
Gene ID: MGYG000000576_1_45
Type: TF
Location: 48056 - 49060 (+)
Type: TF
Location: 48056 - 49060 (+)
Gene ID: MGYG000000576_1_46
Type: CAZyme
Location: 49174 - 50172 (+)
Type: CAZyme
Location: 49174 - 50172 (+)
Gene ID: MGYG000000576_1_47
Type: CAZyme
Location: 50174 - 51511 (+)
Type: CAZyme
Location: 50174 - 51511 (+)
Gene ID: MGYG000000576_1_48
Type: pfam
Location: 51851 - 53803 (+)
Type: pfam
Location: 51851 - 53803 (+)
Gene ID: MGYG000000576_1_49
Type: TC
Location: 53947 - 54807 (+)
Type: TC
Location: 53947 - 54807 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota
Class
Bacilli
Order
Lactobacillales
Family
Streptococcaceae
Genus
Streptococcus
Species
Streptococcus sp015594605
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.