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Cluster: MGYG000000563_CGC13

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000563_71 MGYG000000563_71_1 3 353 + 4.A.6.1.16
pfam MGYG000000563_71 MGYG000000563_71_2 353 634 + YajC
TC MGYG000000563_71 MGYG000000563_71_3 671 1153 + 4.A.6.1.4
TC MGYG000000563_71 MGYG000000563_71_4 1244 2044 + 4.A.6.1.4
TC MGYG000000563_71 MGYG000000563_71_5 2034 3116 + 4.A.6.1.4
TF MGYG000000563_71 MGYG000000563_71_6 3301 4032 + GntR
STP MGYG000000563_71 MGYG000000563_71_7 4147 5313 + SIS | SIS
CAZyme MGYG000000563_71 MGYG000000563_71_8 5433 6602 + CE9
Gene ID: MGYG000000563_71_1
Type: TC
Location: 3 - 353 (+)
Gene ID: MGYG000000563_71_2
Type: pfam
Location: 353 - 634 (+)
Gene ID: MGYG000000563_71_3
Type: TC
Location: 671 - 1153 (+)
Gene ID: MGYG000000563_71_4
Type: TC
Location: 1244 - 2044 (+)
Gene ID: MGYG000000563_71_5
Type: TC
Location: 2034 - 3116 (+)
Gene ID: MGYG000000563_71_6
Type: TF
Location: 3301 - 4032 (+)
Gene ID: MGYG000000563_71_7
Type: STP
Location: 4147 - 5313 (+)
Gene ID: MGYG000000563_71_8
Type: CAZyme
Location: 5433 - 6602 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000563_71_2 vegan > omnivore 1.22302 0.00701

🧭 Explore Read Mapping of CGC

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