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Cluster: MGYG000000550_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000550_41 MGYG000000550_41_7 4049 5482 + 2.A.38.1.1
TC MGYG000000550_41 MGYG000000550_41_8 5479 6918 + 2.A.38.1.3
TC MGYG000000550_41 MGYG000000550_41_9 6941 8383 + 2.A.38.1.3
TC MGYG000000550_41 MGYG000000550_41_10 8575 10653 + 3.A.10.1.13
STP MGYG000000550_41 MGYG000000550_41_11 10789 11733 + PfkB
STP MGYG000000550_41 MGYG000000550_41_12 11793 12050 + PTS-HPr
TC MGYG000000550_41 MGYG000000550_41_13 12069 13721 + 8.A.7.1.1
pfam MGYG000000550_41 MGYG000000550_41_14 13953 15074 + RF-1 | PCRF
NULL(UNKNOWN) MGYG000000550_41 MGYG000000550_41_15 15233 16387 + NULL(UNKNOWN)
[View Structural Homologs]
CAZyme MGYG000000550_41 MGYG000000550_41_16 16553 18067 + CBM50
Gene ID: MGYG000000550_41_7
Type: TC
Location: 4049 - 5482 (+)
Gene ID: MGYG000000550_41_8
Type: TC
Location: 5479 - 6918 (+)
Gene ID: MGYG000000550_41_9
Type: TC
Location: 6941 - 8383 (+)
Gene ID: MGYG000000550_41_10
Type: TC
Location: 8575 - 10653 (+)
Gene ID: MGYG000000550_41_11
Type: STP
Location: 10789 - 11733 (+)
Gene ID: MGYG000000550_41_12
Type: STP
Location: 11793 - 12050 (+)
Gene ID: MGYG000000550_41_13
Type: TC
Location: 12069 - 13721 (+)
Gene ID: MGYG000000550_41_14
Type: pfam
Location: 13953 - 15074 (+)
Gene ID: MGYG000000550_41_15
Type:
Location: 15233 - 16387 (+)
Gene ID: MGYG000000550_41_16
Type: CAZyme
Location: 16553 - 18067 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
MGYG000000550_41_13 vegan > omnivore 1.34516 0.02258

🧭 Explore Read Mapping of CGC

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