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Cluster: MGYG000000539_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000539_17 MGYG000000539_17_2 2749 4347 + 2.A.50.2.1
pfam MGYG000000539_17 MGYG000000539_17_3 4456 5796 + DHHW | DHHW
pfam MGYG000000539_17 MGYG000000539_17_4 6123 7028 + Lipase_GDSL_2
TC MGYG000000539_17 MGYG000000539_17_5 7112 7969 - 3.A.1.1.36
TC MGYG000000539_17 MGYG000000539_17_6 7982 8893 - 3.A.1.1.4
NULL(UNKNOWN) MGYG000000539_17 MGYG000000539_17_7 8968 10395 - NULL(UNKNOWN)
[View Structural Homologs]
TF MGYG000000539_17 MGYG000000539_17_8 10544 11563 - LacI
CAZyme MGYG000000539_17 MGYG000000539_17_9 11881 14316 + GH94
TC MGYG000000539_17 MGYG000000539_17_10 14556 15905 - 2.A.66.1.33
pfam MGYG000000539_17 MGYG000000539_17_11 16187 17833 - ILVD_EDD_N | ILV_EDD_C
TC MGYG000000539_17 MGYG000000539_17_12 17985 19250 - 2.A.56.1.4
pfam MGYG000000539_17 MGYG000000539_17_13 19250 19753 - DctQ
TC MGYG000000539_17 MGYG000000539_17_14 19938 21092 - 2.A.56.1.2
pfam MGYG000000539_17 MGYG000000539_17_15 21867 22802 + Semialdhyde_dh | Semialdhyde_dhC_1
pfam MGYG000000539_17 MGYG000000539_17_16 22807 23955 - DUF2232
TC MGYG000000539_17 MGYG000000539_17_17 24165 24842 + 9.B.143.2.2
Gene ID: MGYG000000539_17_2
Type: TC
Location: 2749 - 4347 (+)
Gene ID: MGYG000000539_17_3
Type: pfam
Location: 4456 - 5796 (+)
Gene ID: MGYG000000539_17_4
Type: pfam
Location: 6123 - 7028 (+)
Gene ID: MGYG000000539_17_5
Type: TC
Location: 7112 - 7969 (-)
Gene ID: MGYG000000539_17_6
Type: TC
Location: 7982 - 8893 (-)
Gene ID: MGYG000000539_17_7
Type:
Location: 8968 - 10395 (-)
Gene ID: MGYG000000539_17_8
Type: TF
Location: 10544 - 11563 (-)
Gene ID: MGYG000000539_17_9
Type: CAZyme
Location: 11881 - 14316 (+)
Gene ID: MGYG000000539_17_10
Type: TC
Location: 14556 - 15905 (-)
Gene ID: MGYG000000539_17_11
Type: pfam
Location: 16187 - 17833 (-)
Gene ID: MGYG000000539_17_12
Type: TC
Location: 17985 - 19250 (-)
Gene ID: MGYG000000539_17_13
Type: pfam
Location: 19250 - 19753 (-)
Gene ID: MGYG000000539_17_14
Type: TC
Location: 19938 - 21092 (-)
Gene ID: MGYG000000539_17_15
Type: pfam
Location: 21867 - 22802 (+)
Gene ID: MGYG000000539_17_16
Type: pfam
Location: 22807 - 23955 (-)
Gene ID: MGYG000000539_17_17
Type: TC
Location: 24165 - 24842 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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