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Cluster: MGYG000000539_CGC4

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme MGYG000000539_6 MGYG000000539_6_49 54693 56252 - GH28
NULL(UNKNOWN) MGYG000000539_6 MGYG000000539_6_50 56254 56670 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000000539_6 MGYG000000539_6_51 56693 58081 - 3.A.1.1.11
TF MGYG000000539_6 MGYG000000539_6_52 58334 59053 + GntR
pfam MGYG000000539_6 MGYG000000539_6_53 59091 60035 - GARS_A | Dala_Dala_lig_N | ATP-grasp | ATP-grasp_3 | CPSase_L_D2 | Dala_Dala_lig_C | RimK
TC MGYG000000539_6 MGYG000000539_6_54 60139 61359 - 3.A.11.1.4
TC MGYG000000539_6 MGYG000000539_6_55 61626 63113 + 9.B.34.1.4
pfam MGYG000000539_6 MGYG000000539_6_56 63198 64841 - TPP_enzyme_M | CO_dh | TPP_enzyme_C | TPP_enzyme_N
NULL(UNKNOWN) MGYG000000539_6 MGYG000000539_6_57 65174 65302 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000000539_6 MGYG000000539_6_58 65426 66556 - 3.B.1.1.5
Gene ID: MGYG000000539_6_49
Type: CAZyme
Location: 54693 - 56252 (-)
Gene ID: MGYG000000539_6_50
Type:
Location: 56254 - 56670 (-)
Gene ID: MGYG000000539_6_51
Type: TC
Location: 56693 - 58081 (-)
Gene ID: MGYG000000539_6_52
Type: TF
Location: 58334 - 59053 (+)
Gene ID: MGYG000000539_6_53
Type: pfam
Location: 59091 - 60035 (-)
Gene ID: MGYG000000539_6_54
Type: TC
Location: 60139 - 61359 (-)
Gene ID: MGYG000000539_6_55
Type: TC
Location: 61626 - 63113 (+)
Gene ID: MGYG000000539_6_56
Type: pfam
Location: 63198 - 64841 (-)
Gene ID: MGYG000000539_6_57
Type:
Location: 65174 - 65302 (-)
Gene ID: MGYG000000539_6_58
Type: TC
Location: 65426 - 66556 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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