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Cluster: MGYG000000539_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC MGYG000000539_5 MGYG000000539_5_68 66785 67360 + 1.E.14.1.15
TC MGYG000000539_5 MGYG000000539_5_69 67357 68052 + 2.A.122.1.2
STP MGYG000000539_5 MGYG000000539_5_70 68421 69518 - PfkB
pfam MGYG000000539_5 MGYG000000539_5_71 69753 70421 - Hydrolase | HAD | HAD_2
TC MGYG000000539_5 MGYG000000539_5_72 70920 71693 - 9.B.28.1.2
TC MGYG000000539_5 MGYG000000539_5_73 71891 73441 - 2.A.15.2.2
pfam MGYG000000539_5 MGYG000000539_5_74 73623 74249 + DUF6553
TC MGYG000000539_5 MGYG000000539_5_75 74262 75272 - 3.A.1.2.3
STP MGYG000000539_5 MGYG000000539_5_76 75344 76321 - Peripla_BP_1
TC MGYG000000539_5 MGYG000000539_5_77 76314 78494 - 8.A.59.2.1
TF MGYG000000539_5 MGYG000000539_5_78 78589 80220 - HTH_AraC | HTH_AraC
NULL(UNKNOWN) MGYG000000539_5 MGYG000000539_5_79 80343 80741 - NULL(UNKNOWN)
[View Structural Homologs]
TC MGYG000000539_5 MGYG000000539_5_80 80910 81914 - 3.A.1.2.3
TC MGYG000000539_5 MGYG000000539_5_81 81946 83454 - 3.A.1.2.3
TC MGYG000000539_5 MGYG000000539_5_82 83562 84680 - 3.A.1.2.3
CAZyme MGYG000000539_5 MGYG000000539_5_83 84991 85923 - GT2
Gene ID: MGYG000000539_5_68
Type: TC
Location: 66785 - 67360 (+)
Gene ID: MGYG000000539_5_69
Type: TC
Location: 67357 - 68052 (+)
Gene ID: MGYG000000539_5_70
Type: STP
Location: 68421 - 69518 (-)
Gene ID: MGYG000000539_5_71
Type: pfam
Location: 69753 - 70421 (-)
Gene ID: MGYG000000539_5_72
Type: TC
Location: 70920 - 71693 (-)
Gene ID: MGYG000000539_5_73
Type: TC
Location: 71891 - 73441 (-)
Gene ID: MGYG000000539_5_74
Type: pfam
Location: 73623 - 74249 (+)
Gene ID: MGYG000000539_5_75
Type: TC
Location: 74262 - 75272 (-)
Gene ID: MGYG000000539_5_76
Type: STP
Location: 75344 - 76321 (-)
Gene ID: MGYG000000539_5_77
Type: TC
Location: 76314 - 78494 (-)
Gene ID: MGYG000000539_5_78
Type: TF
Location: 78589 - 80220 (-)
Gene ID: MGYG000000539_5_79
Type:
Location: 80343 - 80741 (-)
Gene ID: MGYG000000539_5_80
Type: TC
Location: 80910 - 81914 (-)
Gene ID: MGYG000000539_5_81
Type: TC
Location: 81946 - 83454 (-)
Gene ID: MGYG000000539_5_82
Type: TC
Location: 83562 - 84680 (-)
Gene ID: MGYG000000539_5_83
Type: CAZyme
Location: 84991 - 85923 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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